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Tet3 tet methylcytosine dioxygenase 3 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101710771, updated on 26-Mar-2025
Gene symbol
Tet3
Gene description
tet methylcytosine dioxygenase 3
See related
Ensembl:ENSHGLG00000006091 RGD:18930656
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
all
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Try the new Transcripts and proteins table
See Tet3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624749.1 (29371674..29494785, complement)

NW_004624749.1Genomic Context describing neighboring genes Neighboring gene deoxynucleotidyltransferase terminal-interacting protein 2 pseudogene Neighboring gene MOB kinase activator 1A Neighboring gene bolA family member 3 Neighboring gene origin recognition complex subunit 6 pseudogene Neighboring gene uncharacterized LOC106009383 Neighboring gene uncharacterized LOC110349104 Neighboring gene deoxyguanosine kinase

Genomic Sequence:
NW_004624749 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA 5-methylcytosine dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oxidative demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
methylcytosine dioxygenase TET3

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624749.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    29371674..29494785 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004844710.2 → XP_004844767.1  methylcytosine dioxygenase TET3 isoform X1

    See identical proteins and their annotated locations for XP_004844767.1

    UniProtKB/TrEMBL
    A0AAX6SX28, G5AXG8
    Conserved Domains (3) summary
    pfam02008
    Location:50 → 89
    zf-CXXC; CXXC zinc finger domain
    pfam12851
    Location:992 → 1119
    Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
    cl26464
    Location:302 → 755
    Atrophin-1; Atrophin-1 family

  2. XM_013072221.2 → XP_012927675.1  methylcytosine dioxygenase TET3 isoform X1

    See identical proteins and their annotated locations for XP_012927675.1

    UniProtKB/TrEMBL
    A0AAX6SX28, G5AXG8
    Conserved Domains (3) summary
    pfam02008
    Location:50 → 89
    zf-CXXC; CXXC zinc finger domain
    pfam12851
    Location:992 → 1119
    Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
    cl26464
    Location:302 → 755
    Atrophin-1; Atrophin-1 family

  3. XM_021258298.1 → XP_021113957.1  methylcytosine dioxygenase TET3 isoform X1

    UniProtKB/TrEMBL
    A0AAX6SX28, G5AXG8
    Conserved Domains (3) summary
    pfam02008
    Location:50 → 89
    zf-CXXC; CXXC zinc finger domain
    pfam12851
    Location:992 → 1119
    Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
    cl26464
    Location:302 → 755
    Atrophin-1; Atrophin-1 family

  4. XM_021258299.1 → XP_021113958.1  methylcytosine dioxygenase TET3 isoform X1

    UniProtKB/TrEMBL
    A0AAX6SX28, G5AXG8
    Conserved Domains (3) summary
    pfam02008
    Location:50 → 89
    zf-CXXC; CXXC zinc finger domain
    pfam12851
    Location:992 → 1119
    Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
    cl26464
    Location:302 → 755
    Atrophin-1; Atrophin-1 family

  5. XM_013072220.2 → XP_012927674.1  methylcytosine dioxygenase TET3 isoform X1

    See identical proteins and their annotated locations for XP_012927674.1

    UniProtKB/TrEMBL
    A0AAX6SX28, G5AXG8
    Related
    ENSHGLP00000008427.1, ENSHGLT00000008516.1
    Conserved Domains (3) summary
    pfam02008
    Location:50 → 89
    zf-CXXC; CXXC zinc finger domain
    pfam12851
    Location:992 → 1119
    Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
    cl26464
    Location:302 → 755
    Atrophin-1; Atrophin-1 family

  6. XM_021258301.1 → XP_021113960.1  methylcytosine dioxygenase TET3 isoform X2

    UniProtKB/TrEMBL
    A0AAX6SZD3, G5AXG8
    Conserved Domains (2) summary
    pfam12851
    Location:857 → 984
    Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
    cl26464
    Location:167 → 620
    Atrophin-1; Atrophin-1 family

  7. XM_021258300.1 → XP_021113959.1  methylcytosine dioxygenase TET3 isoform X2

    UniProtKB/TrEMBL
    A0AAX6SZD3, G5AXG8
    Related
    ENSHGLP00000008428.1, ENSHGLT00000008517.1
    Conserved Domains (2) summary
    pfam12851
    Location:857 → 984
    Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
    cl26464
    Location:167 → 620
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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