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Setd3 SET domain containing 3, actin N3(tau)-histidine methyltransferase [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101710371, updated on 8-Mar-2024

Summary

Gene symbol
Setd3
Gene description
SET domain containing 3, actin N3(tau)-histidine methyltransferase
See related
Ensembl:ENSHGLG00000009992
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
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Genomic context

See Setd3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624734.1 (4392627..4468961)

NW_004624734.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101709203 Neighboring gene uncharacterized LOC101709423 Neighboring gene coiled-coil domain containing 85C Neighboring gene cyclin K Neighboring gene uncharacterized LOC106007762 Neighboring gene BCL11 transcription factor B

Genomic regions, transcripts, and products

Genomic Sequence:
NW_004624734 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

General protein information

Preferred Names
histone-lysine N-methyltransferase setd3
Names
SET domain containing 3, actin histidine methyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624734.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    4392627..4468961
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004836978.2XP_004837035.1  histone-lysine N-methyltransferase setd3 isoform X2

    See identical proteins and their annotated locations for XP_004837035.1

    UniProtKB/TrEMBL
    A0A0P6JCN2, G5B4A5
    Conserved Domains (2) summary
    pfam00856
    Location:105135
    SET; SET domain
    pfam09273
    Location:353475
    Rubis-subs-bind; Rubisco LSMT substrate-binding
  2. XM_021244485.1XP_021100144.1  histone-lysine N-methyltransferase setd3 isoform X4

    UniProtKB/TrEMBL
    G5B4A5
    Conserved Domains (2) summary
    pfam00856
    Location:100134
    SET; SET domain
    pfam09273
    Location:345470
    Rubis-subs-bind; Rubisco LSMT substrate-binding
  3. XM_004836979.2XP_004837036.1  histone-lysine N-methyltransferase setd3 isoform X2

    See identical proteins and their annotated locations for XP_004837036.1

    UniProtKB/TrEMBL
    A0A0P6JCN2, G5B4A5
    Related
    ENSHGLP00000013995.1, ENSHGLT00000014138.1
    Conserved Domains (2) summary
    pfam00856
    Location:105135
    SET; SET domain
    pfam09273
    Location:353475
    Rubis-subs-bind; Rubisco LSMT substrate-binding
  4. XM_021244481.1XP_021100140.1  histone-lysine N-methyltransferase setd3 isoform X4

    UniProtKB/TrEMBL
    G5B4A5
    Conserved Domains (2) summary
    pfam00856
    Location:100134
    SET; SET domain
    pfam09273
    Location:345470
    Rubis-subs-bind; Rubisco LSMT substrate-binding
  5. XM_004836981.3XP_004837038.1  histone-lysine N-methyltransferase setd3 isoform X5

    Conserved Domains (2) summary
    pfam00856
    Location:110140
    SET; SET domain
    pfam09273
    Location:358397
    Rubis-subs-bind; Rubisco LSMT substrate-binding
  6. XM_004836980.3XP_004837037.1  histone-lysine N-methyltransferase setd3 isoform X3

    UniProtKB/TrEMBL
    G5B4A5
    Conserved Domains (2) summary
    pfam00856
    Location:105135
    SET; SET domain
    pfam09273
    Location:353475
    Rubis-subs-bind; Rubisco LSMT substrate-binding
  7. XM_004836977.3XP_004837034.1  histone-lysine N-methyltransferase setd3 isoform X1

    UniProtKB/TrEMBL
    G5B4A5
    Conserved Domains (2) summary
    pfam00856
    Location:110140
    SET; SET domain
    pfam09273
    Location:358480
    Rubis-subs-bind; Rubisco LSMT substrate-binding