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Pcdh17 protocadherin 17 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101709706, updated on 19-Nov-2025
Gene symbol
Pcdh17
Gene description
protocadherin 17
Locus tag
GW7_18092
See related
Ensembl:ENSHGLG00000006849 RGD:18913226
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624748.1 (18958250..19056278)

NW_004624748.1Genomic Context describing neighboring genes Neighboring gene 26S protease regulatory subunit 4 pseudogene Neighboring gene GTPase NRas pseudogene Neighboring gene uncharacterized LOC110348985 Neighboring gene centromere protein T pseudogene

Genomic Sequence:
NW_004624748 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
protocadherin-17
Names
Protocadherin-17

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624748.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    18958250..19056278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021257926.1 → XP_021113585.1  protocadherin-17 isoform X6

    UniProtKB/TrEMBL
    A0AAX6SYL7, G5AQ94
    Conserved Domains (2) summary
    cd11304
    Location:248 → 348
    Cadherin_repeat; Cadherin tandem repeat domain
    cl09101
    Location:21 → 113
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus

  2. XM_021257922.1 → XP_021113581.1  protocadherin-17 isoform X2

    UniProtKB/TrEMBL
    A0AAX6SV02, G5AQ94
    Conserved Domains (2) summary
    cd11304
    Location:248 → 348
    Cadherin_repeat; Cadherin tandem repeat domain
    cl09101
    Location:21 → 113
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus

  3. XM_021257927.1 → XP_021113586.1  protocadherin-17 isoform X7

    UniProtKB/TrEMBL
    A0AAX6SZ44, G5AQ94
    Conserved Domains (2) summary
    cd11304
    Location:248 → 348
    Cadherin_repeat; Cadherin tandem repeat domain
    cl09101
    Location:21 → 113
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus

  4. XM_021257925.1 → XP_021113584.1  protocadherin-17 isoform X5

    UniProtKB/TrEMBL
    A0AAX6SY96, G5AQ94
    Related
    ENSHGLP00000009548.1, ENSHGLT00000009655.1
    Conserved Domains (2) summary
    cd11304
    Location:248 → 348
    Cadherin_repeat; Cadherin tandem repeat domain
    cl09101
    Location:21 → 113
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus

  5. XM_021257924.1 → XP_021113583.1  protocadherin-17 isoform X4

    UniProtKB/TrEMBL
    A0AAX6SXT9, G5AQ94
    Conserved Domains (2) summary
    cd11304
    Location:248 → 348
    Cadherin_repeat; Cadherin tandem repeat domain
    cl09101
    Location:21 → 113
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus

  6. XM_021257923.1 → XP_021113582.1  protocadherin-17 isoform X3

    UniProtKB/TrEMBL
    A0AAX6SW79, G5AQ94
    Related
    ENSHGLP00000009547.1, ENSHGLT00000009654.1
    Conserved Domains (2) summary
    cd11304
    Location:248 → 348
    Cadherin_repeat; Cadherin tandem repeat domain
    cl09101
    Location:21 → 113
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus

  7. XM_021257921.1 → XP_021113580.1  protocadherin-17 isoform X1

    UniProtKB/TrEMBL
    A0AAX6SWM6, G5AQ94
    Conserved Domains (2) summary
    cd11304
    Location:248 → 348
    Cadherin_repeat; Cadherin tandem repeat domain
    cl09101
    Location:21 → 113
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus
Nucleotide Protein
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