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Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101709583, updated on 1-Mar-2025
Gene symbol
Cbfa2t3
Gene description
CBFA2/RUNX1 partner transcriptional co-repressor 3
See related
Ensembl:ENSHGLG00000013795 RGD:18930204
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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See Cbfa2t3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624746.1 (716848..773169)

NW_004624746.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 22 member 31 Neighboring gene cadherin 15 Neighboring gene acyl-CoA synthetase family member 3 Neighboring gene uncharacterized LOC110348729 Neighboring gene PABPN1 like, cytoplasmic Neighboring gene trafficking protein particle complex subunit 2L

Genomic Sequence:
NW_004624746 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
protein CBFA2T3
Names
CBFA2/RUNX1 translocation partner 3

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624746.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    716848..773169
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021256567.1 → XP_021112226.1  protein CBFA2T3 isoform X5

    UniProtKB/TrEMBL
    A0AAX6SS49, G5C2T4
    Related
    ENSHGLP00000019225.1, ENSHGLT00000019416.1
    Conserved Domains (5) summary
    COG2811
    Location:456 → 522
    NtpH; Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion]
    pfam01753
    Location:528 → 564
    zf-MYND; MYND finger
    pfam06003
    Location:235 → 336
    SMN; Survival motor neuron protein (SMN)
    pfam07531
    Location:147 → 233
    TAFH; NHR1 homology to TAF
    pfam08788
    Location:353 → 419
    NHR2; NHR2 domain like

  2. XM_021256568.1 → XP_021112227.1  protein CBFA2T3 isoform X6

    UniProtKB/TrEMBL
    A0AAX6SR82, G5C2T4
    Related
    ENSHGLP00000019226.1, ENSHGLT00000019417.1
    Conserved Domains (5) summary
    COG2811
    Location:430 → 496
    NtpH; Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion]
    pfam01753
    Location:502 → 538
    zf-MYND; MYND finger
    pfam06003
    Location:209 → 310
    SMN; Survival motor neuron protein (SMN)
    pfam07531
    Location:121 → 207
    TAFH; NHR1 homology to TAF
    pfam08788
    Location:327 → 393
    NHR2; NHR2 domain like

  3. XM_021256560.1 → XP_021112219.1  protein CBFA2T3 isoform X1

    UniProtKB/TrEMBL
    A0AAX6STY2
    Conserved Domains (4) summary
    COG2811
    Location:456 → 522
    NtpH; Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion]
    pfam06003
    Location:235 → 336
    SMN; Survival motor neuron protein (SMN)
    pfam07531
    Location:147 → 233
    TAFH; NHR1 homology to TAF
    pfam08788
    Location:353 → 419
    NHR2; NHR2 domain like

  4. XM_021256562.1 → XP_021112221.1  protein CBFA2T3 isoform X3

    UniProtKB/TrEMBL
    A0AAX6SUW4
    Conserved Domains (4) summary
    COG2811
    Location:430 → 496
    NtpH; Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion]
    pfam06003
    Location:209 → 310
    SMN; Survival motor neuron protein (SMN)
    pfam07531
    Location:121 → 207
    TAFH; NHR1 homology to TAF
    pfam08788
    Location:327 → 393
    NHR2; NHR2 domain like

  5. XM_021256561.1 → XP_021112220.1  protein CBFA2T3 isoform X2

    UniProtKB/TrEMBL
    A0AAX6SUQ2
    Conserved Domains (4) summary
    COG2811
    Location:455 → 521
    NtpH; Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion]
    pfam06003
    Location:234 → 335
    SMN; Survival motor neuron protein (SMN)
    pfam07531
    Location:146 → 232
    TAFH; NHR1 homology to TAF
    pfam08788
    Location:352 → 418
    NHR2; NHR2 domain like

  6. XM_021256571.1 → XP_021112230.1  protein CBFA2T3 isoform X8

    UniProtKB/TrEMBL
    A0AAX6SSR4
    Conserved Domains (3) summary
    pfam06003
    Location:235 → 336
    SMN; Survival motor neuron protein (SMN)
    pfam07531
    Location:147 → 233
    TAFH; NHR1 homology to TAF
    pfam08788
    Location:353 → 419
    NHR2; NHR2 domain like

  7. XM_021256564.1 → XP_021112223.1  protein CBFA2T3 isoform X4

    UniProtKB/TrEMBL
    A0AAX6SWP0
    Conserved Domains (4) summary
    COG2811
    Location:422 → 488
    NtpH; Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion]
    pfam06003
    Location:201 → 302
    SMN; Survival motor neuron protein (SMN)
    pfam07531
    Location:113 → 199
    TAFH; NHR1 homology to TAF
    pfam08788
    Location:319 → 385
    NHR2; NHR2 domain like

  8. XM_021256565.1 → XP_021112224.1  protein CBFA2T3 isoform X4

    UniProtKB/TrEMBL
    A0AAX6SWP0
    Conserved Domains (4) summary
    COG2811
    Location:422 → 488
    NtpH; Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion]
    pfam06003
    Location:201 → 302
    SMN; Survival motor neuron protein (SMN)
    pfam07531
    Location:113 → 199
    TAFH; NHR1 homology to TAF
    pfam08788
    Location:319 → 385
    NHR2; NHR2 domain like

  9. XM_021256566.1 → XP_021112225.1  protein CBFA2T3 isoform X4

    UniProtKB/TrEMBL
    A0AAX6SWP0
    Conserved Domains (4) summary
    COG2811
    Location:422 → 488
    NtpH; Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion]
    pfam06003
    Location:201 → 302
    SMN; Survival motor neuron protein (SMN)
    pfam07531
    Location:113 → 199
    TAFH; NHR1 homology to TAF
    pfam08788
    Location:319 → 385
    NHR2; NHR2 domain like

  10. XM_021256563.1 → XP_021112222.1  protein CBFA2T3 isoform X4

    UniProtKB/TrEMBL
    A0AAX6SWP0
    Conserved Domains (4) summary
    COG2811
    Location:422 → 488
    NtpH; Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion]
    pfam06003
    Location:201 → 302
    SMN; Survival motor neuron protein (SMN)
    pfam07531
    Location:113 → 199
    TAFH; NHR1 homology to TAF
    pfam08788
    Location:319 → 385
    NHR2; NHR2 domain like

  11. XM_021256569.1 → XP_021112228.1  protein CBFA2T3 isoform X7

    UniProtKB/TrEMBL
    A0AAX6SWT5
    Conserved Domains (5) summary
    COG2811
    Location:360 → 426
    NtpH; Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion]
    pfam06003
    Location:139 → 240
    SMN; Survival motor neuron protein (SMN)
    pfam07531
    Location:51 → 137
    TAFH; NHR1 homology to TAF
    pfam08788
    Location:257 → 323
    NHR2; NHR2 domain like
    pfam15822
    Location:445 → 549
    MISS; MAPK-interacting and spindle-stabilizing protein-like

  12. XM_021256570.1 → XP_021112229.1  protein CBFA2T3 isoform X7

    UniProtKB/TrEMBL
    A0AAX6SWT5
    Conserved Domains (5) summary
    COG2811
    Location:360 → 426
    NtpH; Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion]
    pfam06003
    Location:139 → 240
    SMN; Survival motor neuron protein (SMN)
    pfam07531
    Location:51 → 137
    TAFH; NHR1 homology to TAF
    pfam08788
    Location:257 → 323
    NHR2; NHR2 domain like
    pfam15822
    Location:445 → 549
    MISS; MAPK-interacting and spindle-stabilizing protein-like
Nucleotide Protein
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