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Cdh15 cadherin 15 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101707671, updated on 1-Mar-2025
Gene symbol
Cdh15
Gene description
cadherin 15
See related
Ensembl:ENSHGLG00000019172 RGD:18907090
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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See Cdh15 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624746.1 (603723..617616, complement)

NW_004624746.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain containing 11 Neighboring gene transmembrane protein 56 pseudogene Neighboring gene uncharacterized LOC106009237 Neighboring gene solute carrier family 22 member 31 Neighboring gene acyl-CoA synthetase family member 3 Neighboring gene uncharacterized LOC110348729 Neighboring gene CBFA2/RUNX1 partner transcriptional co-repressor 3

Genomic Sequence:
NW_004624746 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adherens junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
cadherin-15

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624746.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    603723..617616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004842651.3 → XP_004842708.1  cadherin-15 isoform X2

    UniProtKB/TrEMBL
    A0AAX6P2W5
    Related
    ENSHGLP00000026964.1, ENSHGLT00000027203.1
    Conserved Domains (3) summary
    cd11304
    Location:377 → 477
    Cadherin_repeat; Cadherin tandem repeat domain
    pfam01049
    Location:643 → 783
    Cadherin_C; Cadherin cytoplasmic region
    cl09101
    Location:499 → 578
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus

  2. XM_021256555.1 → XP_021112214.1  cadherin-15 isoform X1

    UniProtKB/TrEMBL
    A0AAX6SUM6
    Conserved Domains (3) summary
    cd11304
    Location:377 → 477
    Cadherin_repeat; Cadherin tandem repeat domain
    pfam01049
    Location:630 → 798
    Cadherin_C; Cadherin cytoplasmic region
    cl09101
    Location:499 → 578
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus

  3. XM_013071439.2 → XP_012926893.1  cadherin-15 isoform X5

    UniProtKB/TrEMBL
    A0AAX6QWI5
    Conserved Domains (3) summary
    cd11304
    Location:377 → 477
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00112
    Location:68 → 148
    CA; Cadherin repeats
    cl09101
    Location:499 → 578
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus

  4. XM_013071438.2 → XP_012926892.1  cadherin-15 isoform X4

    UniProtKB/TrEMBL
    A0AAX6QT36
    Conserved Domains (3) summary
    cd11304
    Location:377 → 477
    Cadherin_repeat; Cadherin tandem repeat domain
    pfam01049
    Location:643 → 727
    Cadherin_C; Cadherin cytoplasmic region
    cl09101
    Location:499 → 578
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus

  5. XM_021256556.1 → XP_021112215.1  cadherin-15 isoform X3

    UniProtKB/TrEMBL
    A0AAX6SSQ0
    Conserved Domains (4) summary
    cd11304
    Location:316 → 416
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00112
    Location:7 → 87
    CA; Cadherin repeats
    pfam01049
    Location:569 → 737
    Cadherin_C; Cadherin cytoplasmic region
    cl09101
    Location:438 → 517
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus

  6. XM_013071440.2 → XP_012926894.1  cadherin-15 isoform X6

    UniProtKB/TrEMBL
    A0AAX6QVM7
    Conserved Domains (3) summary
    cd11304
    Location:377 → 477
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00112
    Location:68 → 148
    CA; Cadherin repeats
    cl09101
    Location:499 → 578
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus
Nucleotide Protein
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