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Arid5a AT-rich interaction domain 5A [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101706713, updated on 1-Mar-2025
Gene symbol
Arid5a
Gene description
AT-rich interaction domain 5A
See related
Ensembl:ENSHGLG00000007255 RGD:18914439
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
all
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See Arid5a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624749.1 (2491162..2504580)

NW_004624749.1Genomic Context describing neighboring genes Neighboring gene transcription initiation factor TFIID subunit 12 pseudogene Neighboring gene neuralized E3 ubiquitin protein ligase 3 Neighboring gene KAT8 regulatory NSL complex subunit 3 Neighboring gene uncharacterized LOC110349052 Neighboring gene fer-1 like family member 5 Neighboring gene lectin, mannose binding 2 like

Genomic Sequence:
NW_004624749 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
AT-rich interactive domain-containing protein 5A

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624749.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    2491162..2504580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004844364.2 → XP_004844421.1  AT-rich interactive domain-containing protein 5A isoform X1

    UniProtKB/TrEMBL
    A0AAX6P6I5, G5BMV4
    Conserved Domains (1) summary
    smart00501
    Location:51 → 143
    BRIGHT; BRIGHT, ARID (A/T-rich interaction domain) domain

  2. XM_021258016.1 → XP_021113675.1  AT-rich interactive domain-containing protein 5A isoform X3

    UniProtKB/TrEMBL
    A0AAX6QWH2

  3. XM_021258015.1 → XP_021113674.1  AT-rich interactive domain-containing protein 5A isoform X2

    UniProtKB/TrEMBL
    A0AAX6SYJ2, G5BMV4
    Related
    ENSHGLP00000010112.1, ENSHGLT00000010226.1
    Conserved Domains (1) summary
    smart00501
    Location:50 → 142
    BRIGHT; ARID (A/T-rich interaction domain) domain

  4. XM_013072203.2 → XP_012927657.1  AT-rich interactive domain-containing protein 5A isoform X3

    UniProtKB/TrEMBL
    A0AAX6QWH2
Nucleotide Protein
Heading Accession and Version

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