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Dhx38 DEAH-box helicase 38 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101706098, updated on 1-Mar-2025
Gene symbol
Dhx38
Gene description
DEAH-box helicase 38
See related
Ensembl:ENSHGLG00000013308 RGD:18906049
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
all
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Try the new Transcripts and proteins table
See Dhx38 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624746.1 (14301921..14319649)

NW_004624746.1Genomic Context describing neighboring genes Neighboring gene thioredoxin like 4B Neighboring gene haptoglobin Neighboring gene polyamine modulated factor 1 binding protein 1 Neighboring gene uncharacterized LOC110348773 Neighboring gene uncharacterized LOC110348713

Genomic Sequence:
NW_004624746 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624746.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    14301921..14319649
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004842923.2 → XP_004842980.1  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

    See identical proteins and their annotated locations for XP_004842980.1

    UniProtKB/TrEMBL
    A0AAX6P3W4, G5B5U8
    Related
    ENSHGLP00000018592.1, ENSHGLT00000018777.1
    Conserved Domains (2) summary
    COG1643
    Location:518 → 1147
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    pfam12316
    Location:188 → 269
    Dsh_C; Segment polarity protein dishevelled (Dsh) C terminal

  2. XM_004842922.1 → XP_004842979.1  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

    See identical proteins and their annotated locations for XP_004842979.1

    UniProtKB/TrEMBL
    A0AAX6P3W4, G5B5U8
    Conserved Domains (2) summary
    COG1643
    Location:518 → 1147
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    pfam12316
    Location:188 → 269
    Dsh_C; Segment polarity protein dishevelled (Dsh) C terminal

  3. XM_021256740.1 → XP_021112399.1  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

    UniProtKB/TrEMBL
    A0AAX6P3W4, G5B5U8
    Related
    ENSHGLP00000018593.1, ENSHGLT00000018778.1
    Conserved Domains (2) summary
    COG1643
    Location:518 → 1147
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    pfam12316
    Location:188 → 269
    Dsh_C; Segment polarity protein dishevelled (Dsh) C terminal
Nucleotide Protein
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