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Elf1 E74 like ETS transcription factor 1 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101702853, updated on 1-Mar-2025
Gene symbol
Elf1
Gene description
E74 like ETS transcription factor 1
See related
Ensembl:ENSHGLG00000005329 RGD:18918174
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
all
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See Elf1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624748.1 (13987001..14090451)

NW_004624748.1Genomic Context describing neighboring genes Neighboring gene protein cornichon homolog 1 pseudogene Neighboring gene WW domain binding protein 4 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene nuclear nucleic acid-binding protein C1D pseudogene Neighboring gene SGT1 assembly cochaperone of MIS12 kinetochore complex Neighboring gene chondromodulin

Genomic Sequence:
NW_004624748 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ETS-related transcription factor Elf-1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624748.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    13987001..14090451
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021257914.1 → XP_021113573.1  ETS-related transcription factor Elf-1 isoform X1

    UniProtKB/TrEMBL
    A0A0P6JDW2
    Conserved Domains (3) summary
    smart00413
    Location:207 → 289
    ETS; erythroblast transformation specific domain
    pfam12310
    Location:2 → 111
    Elf-1_N; Transcription factor protein N terminal
    cl25764
    Location:374 → 503
    PAT1; Topoisomerase II-associated protein PAT1

  2. XM_021257915.1 → XP_021113574.1  ETS-related transcription factor Elf-1 isoform X3

    UniProtKB/TrEMBL
    A0AAX6SX63
    Conserved Domains (3) summary
    smart00413
    Location:148 → 230
    ETS; erythroblast transformation specific domain
    pfam12310
    Location:1 → 52
    Elf-1_N; Transcription factor protein N terminal
    cl25764
    Location:315 → 444
    PAT1; Topoisomerase II-associated protein PAT1

  3. XM_004844262.3 → XP_004844319.1  ETS-related transcription factor Elf-1 isoform X1

    UniProtKB/TrEMBL
    A0A0P6JDW2
    Related
    ENSHGLP00000007312.1, ENSHGLT00000007397.1
    Conserved Domains (3) summary
    smart00413
    Location:207 → 289
    ETS; erythroblast transformation specific domain
    pfam12310
    Location:2 → 111
    Elf-1_N; Transcription factor protein N terminal
    cl25764
    Location:374 → 503
    PAT1; Topoisomerase II-associated protein PAT1

  4. XM_004844263.3 → XP_004844320.1  ETS-related transcription factor Elf-1 isoform X2

    UniProtKB/TrEMBL
    A0AAX6P615
    Conserved Domains (2) summary
    pfam00178
    Location:186 → 265
    Ets; Ets-domain
    pfam12310
    Location:2 → 111
    Elf-1_N; Transcription factor protein N terminal
Nucleotide Protein
Heading Accession and Version

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