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Atxn1l ataxin 1 like [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101701688, updated on 1-Mar-2025
Gene symbol
Atxn1l
Gene description
ataxin 1 like
Locus tag
GW7_16423
See related
Ensembl:ENSHGLG00000009837 RGD:18932394
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
all
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See Atxn1l in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624746.1 (14119413..14130622)

NW_004624746.1Genomic Context describing neighboring genes Neighboring gene CD63 antigen pseudogene Neighboring gene IST1 homolog Neighboring gene zinc finger protein 821 Neighboring gene IST1 homolog Neighboring gene polycystin 1 like 3, transient receptor potential channel interacting

Genomic Sequence:
NW_004624746 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ataxin-1-like
Names
Ataxin-1-like protein

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624746.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    14119413..14130622
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021256741.1 → XP_021112400.1  ataxin-1-like isoform X1

    UniProtKB/TrEMBL
    A0AAX6SVA2
    Conserved Domains (2) summary
    pfam08517
    Location:468 → 579
    AXH; Ataxin-1 and HBP1 module (AXH)
    cl26464
    Location:86 → 252
    Atrophin-1; Atrophin-1 family

  2. XM_021256744.1 → XP_021112403.1  ataxin-1-like isoform X3

    UniProtKB/TrEMBL
    A0AAX6SVH8
    Conserved Domains (2) summary
    pfam08517
    Location:468 → 572
    AXH; Ataxin-1 and HBP1 module (AXH)
    cl26464
    Location:86 → 252
    Atrophin-1; Atrophin-1 family

  3. XM_004842908.3 → XP_004842965.1  ataxin-1-like isoform X2

    See identical proteins and their annotated locations for XP_004842965.1

    UniProtKB/TrEMBL
    G5BNU0
    Related
    ENSHGLP00000013780.1, ENSHGLT00000013921.1
    Conserved Domains (1) summary
    pfam08517
    Location:474 → 578
    AXH; Ataxin-1 and HBP1 module (AXH)

  4. XM_021256743.1 → XP_021112402.1  ataxin-1-like isoform X1

    UniProtKB/TrEMBL
    A0AAX6SVA2
    Conserved Domains (2) summary
    pfam08517
    Location:468 → 579
    AXH; Ataxin-1 and HBP1 module (AXH)
    cl26464
    Location:86 → 252
    Atrophin-1; Atrophin-1 family

  5. XM_021256742.1 → XP_021112401.1  ataxin-1-like isoform X1

    UniProtKB/TrEMBL
    A0AAX6SVA2
    Conserved Domains (2) summary
    pfam08517
    Location:468 → 579
    AXH; Ataxin-1 and HBP1 module (AXH)
    cl26464
    Location:86 → 252
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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