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LOC101698338 E3 SUMO-protein ligase RanBP2 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101698338, updated on 1-Mar-2025
Gene symbol
LOC101698338
Gene description
E3 SUMO-protein ligase RanBP2
See related
Ensembl:ENSHGLG00000018887 RGD:18907688
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Also known as
Ranbp2
Orthologs
human mouse all
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See LOC101698338 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624749.1 (11862670..11923291)

NW_004624749.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain-containing protein 44 pseudogene Neighboring gene LIM zinc finger domain containing 1 Neighboring gene uncharacterized LOC106009377 Neighboring gene vomeronasal type-2 receptor 116-like Neighboring gene coiled-coil domain containing 138 Neighboring gene ectodysplasin A receptor

Genomic Sequence:
NW_004624749 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NLS-bearing protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein peptidyl-prolyl isomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
E3 SUMO-protein ligase RanBP2
Names
RAN binding protein 2

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624749.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    11862670..11923291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004844514.2 → XP_004844571.1  E3 SUMO-protein ligase RanBP2 isoform X1

    UniProtKB/TrEMBL
    A0AAX6P6I2, G5CB92
    Related
    ENSHGLP00000026551.1, ENSHGLT00000026787.1
    Conserved Domains (12) summary
    COG0457
    Location:10 → 144
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    cd01926
    Location:2928 → 3086
    cyclophilin_ABH_like; cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which ...
    cd13177
    Location:1904 → 2020
    RanBD2_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 2
    cd13178
    Location:2789 → 2905
    RanBD4_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 4
    cd14684
    Location:1180 → 1296
    RanBD1_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 1
    cd14685
    Location:2201 → 2317
    RanBD3_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 3
    sd00025
    Location:1413 → 1432
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    sd00006
    Location:59 → 89
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:60 → 92
    TPR_1; Tetratricopeptide repeat
    pfam00641
    Location:1471 → 1499
    zf-RanBP; Zn-finger in Ran binding protein and others
    pfam12185
    Location:2586 → 2644
    IR1-M; Nup358/RanBP2 E3 ligase domain
    cl23782
    Location:838 → 924
    RCR; Chitin synthesis regulation, resistance to Congo red

  2. XM_004844515.2 → XP_004844572.1  E3 SUMO-protein ligase RanBP2 isoform X2

    UniProtKB/TrEMBL
    A0AAX6P5S2, G5CB92
    Conserved Domains (12) summary
    COG0457
    Location:10 → 144
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    cd01926
    Location:2927 → 3085
    cyclophilin_ABH_like; cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which ...
    cd13177
    Location:1904 → 2020
    RanBD2_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 2
    cd13178
    Location:2788 → 2904
    RanBD4_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 4
    cd14684
    Location:1180 → 1296
    RanBD1_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 1
    cd14685
    Location:2201 → 2317
    RanBD3_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 3
    sd00025
    Location:1413 → 1432
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    sd00006
    Location:59 → 89
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:60 → 92
    TPR_1; Tetratricopeptide repeat
    pfam00641
    Location:1471 → 1499
    zf-RanBP; Zn-finger in Ran binding protein and others
    pfam12185
    Location:2586 → 2644
    IR1-M; Nup358/RanBP2 E3 ligase domain
    cl23782
    Location:838 → 924
    RCR; Chitin synthesis regulation, resistance to Congo red

  3. XM_004844516.2 → XP_004844573.1  E3 SUMO-protein ligase RanBP2 isoform X3

    UniProtKB/TrEMBL
    A0AAX6P5V2, G5CB92
    Conserved Domains (12) summary
    COG0457
    Location:10 → 144
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    cd01926
    Location:2927 → 3085
    cyclophilin_ABH_like; cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which ...
    cd13177
    Location:1904 → 2020
    RanBD2_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 2
    cd13178
    Location:2788 → 2904
    RanBD4_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 4
    cd14684
    Location:1180 → 1296
    RanBD1_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 1
    cd14685
    Location:2201 → 2317
    RanBD3_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 3
    sd00025
    Location:1413 → 1432
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    sd00006
    Location:59 → 89
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:60 → 92
    TPR_1; Tetratricopeptide repeat
    pfam00641
    Location:1471 → 1499
    zf-RanBP; Zn-finger in Ran binding protein and others
    pfam12185
    Location:2585 → 2643
    IR1-M; Nup358/RanBP2 E3 ligase domain
    cl23782
    Location:838 → 924
    RCR; Chitin synthesis regulation, resistance to Congo red
Nucleotide Protein
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