U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101697932 28S ribosomal protein S17, mitochondrial [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101697932, updated on 1-Mar-2025
Gene symbol
LOC101697932
Gene description
28S ribosomal protein S17, mitochondrial
Locus tag
GW7_14811
See related
Ensembl:ENSHGLG00000016304 RGD:18919150
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Also known as
Mrps17; Znf713
NEW
Try the new Gene table
Try the new Transcript table
See LOC101697932 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624740.1 (8138284..8172095)

NW_004624740.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 717 Neighboring gene zinc finger protein 39-like Neighboring gene septin 14 Neighboring gene E3 ubiquitin-protein ligase XIAP pseudogene Neighboring gene uncharacterized LOC110348209 Neighboring gene myotubularin-related protein 2-like Neighboring gene nipsnap homolog 2 Neighboring gene phosphoserine phosphatase

Genomic Sequence:
NW_004624740 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
28S ribosomal protein S17, mitochondrial; zinc finger protein 713
Names
mitochondrial ribosomal protein S17

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624740.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    8138284..8172095
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004839953.3 → XP_004840010.1  28S ribosomal protein S17, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0AAX6NZ45
    Conserved Domains (3) summary
    smart00349
    Location:38 → 97
    KRAB; krueppel associated box
    pfam00366
    Location:129 → 197
    Ribosomal_S17; Ribosomal protein S17
    pfam01352
    Location:38 → 77
    KRAB; KRAB box

  2. XM_013070452.2 → XP_012925906.1  zinc finger protein 713 isoform X2

    See identical proteins and their annotated locations for XP_012925906.1

    UniProtKB/TrEMBL
    A0AAX6QTU4
    Conserved Domains (4) summary
    smart00349
    Location:32 → 91
    KRAB; krueppel associated box
    COG5048
    Location:183 → 427
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:287 → 307
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:383 → 408
    zf-H2C2_2; Zinc-finger double domain

  3. XM_021254300.1 → XP_021109959.1  zinc finger protein 713 isoform X3

    UniProtKB/TrEMBL
    A0AAX6SMH0
    Conserved Domains (4) summary
    COG5048
    Location:223 → 288
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:227 → 247
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:323 → 348
    zf-H2C2_2; Zinc-finger double domain
    cl02581
    Location:1 → 31
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box

  4. XM_021254301.1 → XP_021109960.1  zinc finger protein 713 isoform X3

    UniProtKB/TrEMBL
    A0AAX6SMH0
    Conserved Domains (4) summary
    COG5048
    Location:223 → 288
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:227 → 247
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:323 → 348
    zf-H2C2_2; Zinc-finger double domain
    cl02581
    Location:1 → 31
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box

  5. XM_004839949.3 → XP_004840006.1  zinc finger protein 713 isoform X2

    See identical proteins and their annotated locations for XP_004840006.1

    UniProtKB/TrEMBL
    A0AAX6QTU4
    Conserved Domains (4) summary
    smart00349
    Location:32 → 91
    KRAB; krueppel associated box
    COG5048
    Location:183 → 427
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:287 → 307
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:383 → 408
    zf-H2C2_2; Zinc-finger double domain

  6. XM_004839947.3 → XP_004840004.1  zinc finger protein 713 isoform X1

    See identical proteins and their annotated locations for XP_004840004.1

    UniProtKB/TrEMBL
    A0AAX6SPP6
    Conserved Domains (4) summary
    smart00349
    Location:38 → 97
    KRAB; krueppel associated box
    COG5048
    Location:189 → 433
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:293 → 313
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:389 → 414
    zf-H2C2_2; Zinc-finger double domain

  7. XM_004839948.3 → XP_004840005.1  zinc finger protein 713 isoform X1

    See identical proteins and their annotated locations for XP_004840005.1

    UniProtKB/TrEMBL
    A0AAX6SPP6
    Conserved Domains (4) summary
    smart00349
    Location:38 → 97
    KRAB; krueppel associated box
    COG5048
    Location:189 → 433
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:293 → 313
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:389 → 414
    zf-H2C2_2; Zinc-finger double domain

  8. XM_021254297.1 → XP_021109956.1  zinc finger protein 713 isoform X1

    UniProtKB/TrEMBL
    A0AAX6SPP6
    Conserved Domains (4) summary
    smart00349
    Location:38 → 97
    KRAB; krueppel associated box
    COG5048
    Location:189 → 433
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:293 → 313
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:389 → 414
    zf-H2C2_2; Zinc-finger double domain

  9. XM_021254298.1 → XP_021109957.1  zinc finger protein 713 isoform X1

    UniProtKB/TrEMBL
    A0AAX6SPP6
    Conserved Domains (4) summary
    smart00349
    Location:38 → 97
    KRAB; krueppel associated box
    COG5048
    Location:189 → 433
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:293 → 313
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:389 → 414
    zf-H2C2_2; Zinc-finger double domain

  10. XM_021254299.1 → XP_021109958.1  zinc finger protein 713 isoform X2

    UniProtKB/TrEMBL
    A0AAX6QTU4
    Conserved Domains (4) summary
    smart00349
    Location:32 → 91
    KRAB; krueppel associated box
    COG5048
    Location:183 → 427
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:287 → 307
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:383 → 408
    zf-H2C2_2; Zinc-finger double domain

  11. XM_004839951.2 → XP_004840008.1  zinc finger protein 713 isoform X3

    UniProtKB/TrEMBL
    A0AAX6SMH0
    Related
    ENSHGLP00000022859.1, ENSHGLT00000023073.1
    Conserved Domains (4) summary
    COG5048
    Location:223 → 288
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:227 → 247
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:323 → 348
    zf-H2C2_2; Zinc-finger double domain
    cl02581
    Location:1 → 31
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box

  12. XM_004839956.3 → XP_004840013.1  28S ribosomal protein S17, mitochondrial isoform X5

    See identical proteins and their annotated locations for XP_004840013.1

    UniProtKB/TrEMBL
    G5ASS0
    Conserved Domains (1) summary
    pfam00366
    Location:15 → 83
    Ribosomal_S17; Ribosomal protein S17

  13. XM_004839955.3 → XP_004840012.1  28S ribosomal protein S17, mitochondrial isoform X5

    See identical proteins and their annotated locations for XP_004840012.1

    UniProtKB/TrEMBL
    G5ASS0
    Conserved Domains (1) summary
    pfam00366
    Location:15 → 83
    Ribosomal_S17; Ribosomal protein S17

  14. XM_004839954.3 → XP_004840011.1  28S ribosomal protein S17, mitochondrial isoform X5

    See identical proteins and their annotated locations for XP_004840011.1

    UniProtKB/TrEMBL
    G5ASS0
    Conserved Domains (1) summary
    pfam00366
    Location:15 → 83
    Ribosomal_S17; Ribosomal protein S17
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases