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Atg101 autophagy related 101 [ Octodon degus (degu) ]

Gene ID: 101580253, updated on 30-May-2018

Summary

Gene symbol
Atg101
Gene description
autophagy related 101
See related
Ensembl:ENSODEG00000011080
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs

Genomic context

See Atg101 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524669.1 (4309209..4319011)

NW_004524669.1Genomic Context describing neighboring genes Neighboring gene chromatin accessibility complex protein 1-like Neighboring gene nuclear receptor subfamily 4 group A member 1 Neighboring gene keratin 80 Neighboring gene chromosome unknown C12orf80 homolog

Genomic regions, transcripts, and products

Genomic Sequence:
NW_004524669 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
autophagy-related protein 101

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524669.1 Reference OctDeg1.0 Primary Assembly

    Range
    4309209..4319011
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023722618.1XP_023578386.1  autophagy-related protein 101

    Conserved Domains (1) summary
    pfam07855
    Location:9172
    ATG101; Autophagy-related protein 101
  2. XM_004637843.2XP_004637900.1  autophagy-related protein 101

    See identical proteins and their annotated locations for XP_004637900.1

    Conserved Domains (1) summary
    pfam07855
    Location:9172
    ATG101; Autophagy-related protein 101
  3. XM_023722620.1XP_023578388.1  autophagy-related protein 101

    Conserved Domains (1) summary
    pfam07855
    Location:9172
    ATG101; Autophagy-related protein 101
  4. XM_023722621.1XP_023578389.1  autophagy-related protein 101

    Conserved Domains (1) summary
    pfam07855
    Location:9172
    ATG101; Autophagy-related protein 101
  5. XM_023722619.1XP_023578387.1  autophagy-related protein 101

    Related
    ENSODEP00000015007.1, ENSODET00000015204.1
    Conserved Domains (1) summary
    pfam07855
    Location:9172
    ATG101; Autophagy-related protein 101
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