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tgm1l1 transglutaminase 1 like 1 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101483426, updated on 8-Mar-2024

Summary

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Gene symbol
tgm1l1
Gene description
transglutaminase 1 like 1
See related
Ensembl:ENSMZEG00005014117
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Also known as
tgm1
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: LG18
Exon count:
14
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG18 NC_036797.1 (24309895..24324763)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531818.1 (1233633..1248919, complement)

Linkage Group LG18 - NC_036797.1Genomic Context describing neighboring genes Neighboring gene RAS (RAD and GEM)-like GTP binding 2 Neighboring gene NOP9 nucleolar protein Neighboring gene abhydrolase domain containing 4, N-acyl phospholipase B Neighboring gene defender against cell death 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-glutamine gamma-glutamyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptide cross-linking IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein-glutamine gamma-glutamyltransferase K

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036797.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    24309895..24324763
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004565336.4 → XP_004565393.2  protein-glutamine gamma-glutamyltransferase K

    UniProtKB/TrEMBL
    A0A3P9CAA0
    Related
    ENSMZEP00005018821.1, ENSMZET00005019425.1
    Conserved Domains (3) summary
    smart00460
    Location:365 → 456
    TGc; Transglutaminase/protease-like homologues
    pfam00868
    Location:101 → 220
    Transglut_N; Transglutaminase family
    pfam00927
    Location:686 → 781
    Transglut_C; Transglutaminase family, C-terminal ig like domain
Nucleotide Protein
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Gene LinkOut

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