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LOC101479420 prostaglandin G/H synthase 1 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101479420, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101479420
Gene description
prostaglandin G/H synthase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Also known as
pdcl
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Genomic context

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Location:
chromosome: LG7
Exon count:
13
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG7 NC_036786.1 (48338976..48355437)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531732.1 (2744717..2757384)

Linkage Group LG7 - NC_036786.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD72 Neighboring gene small nucleolar RNA SNORD72 Neighboring gene ribosomal protein L37 Neighboring gene uncharacterized LOC101480866 Neighboring gene ribosomal protein L28

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables prostaglandin-endoperoxide synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cyclooxygenase pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: prostaglandin G/H synthase 1
Names
phosducin like
phosducin-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036786.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    48338976..48355437
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004549752.3 → XP_004549809.2  LOW QUALITY PROTEIN: prostaglandin G/H synthase 1

    Conserved Domains (3) summary
    cd09816
    Location:88 → 574
    prostaglandin_endoperoxide_synthase; Animal prostaglandin endoperoxide synthase and related bacterial proteins
    pfam02114
    Location:608 → 843
    Phosducin
    pfam00008
    Location:34 → 66
    EGF; EGF-like domain
Nucleotide Protein
Heading Accession and Version

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