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PITX2 paired like homeodomain 2 [ Tursiops truncatus (common bottlenose dolphin) ]

Gene ID: 101327215, updated on 8-Mar-2024

Summary

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Gene symbol
PITX2
Gene description
paired like homeodomain 2
See related
EnsemblRapid:ENSTTRG00000030329
Gene type
protein coding
RefSeq status
MODEL
Organism
Tursiops truncatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
102 current mTurTru1.mat.Y (GCF_011762595.1) 5 NC_047038.1 (29299903..29324792)
101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017842696.1 (54185126..54209998, complement)

Chromosome 5 - NC_047038.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109548747 Neighboring gene small integral membrane protein 7-like Neighboring gene zinc finger protein 177-like Neighboring gene uncharacterized LOC117312380 Neighboring gene glutamyl aminopeptidase Neighboring gene 40S ribosomal protein S26-like Neighboring gene ELOVL fatty acid elongase 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pituitary homeobox 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mTurTru1.mat.Y Primary Assembly

Genomic

  1. NC_047038.1 Reference mTurTru1.mat.Y Primary Assembly

    Range
    29299903..29324792
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019928064.1 → XP_019783623.1  pituitary homeobox 2 isoform X2

    UniProtKB/TrEMBL
    A0A2U4ARN5
    Related
    ENSTTRP00000031104.1, ENSTTRT00000043367.1
    Conserved Domains (2) summary
    pfam00046
    Location:89 → 142
    Homeobox; Homeobox domain
    pfam03826
    Location:275 → 292
    OAR; OAR domain

  2. XM_019928065.1 → XP_019783624.1  pituitary homeobox 2 isoform X3

    UniProtKB/TrEMBL
    A0A2U4AS47
    Related
    ENSTTRP00000025661.1, ENSTTRT00000038715.1
    Conserved Domains (2) summary
    pfam00046
    Location:43 → 96
    Homeobox; Homeobox domain
    pfam03826
    Location:229 → 246
    OAR; OAR domain

  3. XM_019928063.2 → XP_019783622.1  pituitary homeobox 2 isoform X1

    UniProtKB/TrEMBL
    A0A2U4ARN3
    Related
    ENSTTRP00000023700.1, ENSTTRT00000031847.1
    Conserved Domains (3) summary
    pfam06632
    Location:64 → 122
    XRCC4; DNA double-strand break repair and V(D)J recombination protein XRCC4
    pfam00046
    Location:97 → 150
    Homeobox; Homeobox domain
    pfam03826
    Location:283 → 300
    OAR; OAR domain
Nucleotide Protein
Heading Accession and Version

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