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meltf melanotransferrin [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101171320, updated on 8-Mar-2024

Summary

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Gene symbol
meltf
Gene description
melanotransferrin
See related
EnsemblRapid:ENSORLG00000011217
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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See meltf in Genome Data Viewer
Location:
chromosome: 4
Exon count:
16
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 4 NC_019862.2 (17979006..17987809)
102 previous assembly ASM31367v1 (GCF_000313675.1) 4 NC_019862.1 (19135023..19143826)

Chromosome 4 - NC_019862.2Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 7 Neighboring gene discs large homolog 1-like protein Neighboring gene uncharacterized LOC101159004 Neighboring gene FKBP prolyl isomerase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in iron ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
melanotransferrin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019862.2 Reference ASM223467v1 Primary Assembly

    Range
    17979006..17987809
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011474176.2 → XP_011472478.1  melanotransferrin

    UniProtKB/TrEMBL
    A0A3P9KBY5, H2M6H2
    Related
    ENSORLP00000014067.2, ENSORLT00000014068.3
    Conserved Domains (2) summary
    smart00094
    Location:362 → 691
    TR_FER; Transferrin
    cd13529
    Location:362 → 690
    PBP2_transferrin; Transferrin family of the type 2 periplasmic-binding protein superfamily
Nucleotide Protein
Heading Accession and Version

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