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ascl1 achaete-scute family bHLH transcription factor 1 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101168909, updated on 17-Feb-2018

Summary

Gene symbol
ascl1
Gene description
achaete-scute family bHLH transcription factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs

Genomic context

See ascl1 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
2
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 23 NC_019881.2 (20238130..20239810, complement)
102 previous assembly ASM31367v1 (GCF_000313675.1) 23 NC_019881.1 (20933336..20935037, complement)

Chromosome 23 - NC_019881.2Genomic Context describing neighboring genes Neighboring gene phenylalanine hydroxylase Neighboring gene mucin-17 Neighboring gene integrin alpha FG-GAP repeat containing 2 Neighboring gene nuclear receptor interacting protein 2

Genomic regions, transcripts, and products

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019881.2 Reference ASM223467v1 Primary Assembly

    Range
    20238130..20239810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004083208.4XP_004083256.1  achaete-scute homolog 1

    Conserved Domains (1) summary
    smart00353
    Location:101143
    HLH; helix loop helix domain
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