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LOC101162528 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101162528, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101162528
Gene description
deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like
See related
EnsemblRapid:ENSORLG00000021917
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
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Genomic context

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Location:
chromosome: 7
Exon count:
16
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 7 NC_019865.2 (14682551..14691587)
102 previous assembly ASM31367v1 (GCF_000313675.1) 7 NC_019865.1 (14770480..14780407)

Chromosome 7 - NC_019865.2Genomic Context describing neighboring genes Neighboring gene Mullerian inhibiting substance type II receptor Neighboring gene NUAK family SNF1-like kinase 1 Neighboring gene SAM domain and HD domain 1 Neighboring gene deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dGTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dGTP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019865.2 Reference ASM223467v1 Primary Assembly

    Range
    14682551..14691587
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011477190.3 → XP_011475492.1  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like

    Related
    ENSORLP00000045220.2, ENSORLT00000044675.2
    Conserved Domains (2) summary
    smart00471
    Location:52 → 115
    HDc; Metal dependent phosphohydrolases with conserved 'HD' motif
    COG1078
    Location:8 → 405
    YdhJ; HD superfamily phosphohydrolase [General function prediction only]
Nucleotide Protein
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