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LOC101158509 poliovirus receptor homolog [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101158509, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101158509
Gene description
poliovirus receptor homolog
See related
EnsemblRapid:ENSORLG00000006159
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
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Genomic context

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Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 2 NC_019860.2 (23177899..23191208)
102 previous assembly ASM31367v1 (GCF_000313675.1) 2 NC_019860.1 (26231150..26244695)

Chromosome 2 - NC_019860.2Genomic Context describing neighboring genes Neighboring gene OX-2 membrane glycoprotein-like Neighboring gene OX-2 membrane glycoprotein Neighboring gene B- and T-lymphocyte attenuator-like Neighboring gene splicing factor U2AF 35 kDa subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell-cell adhesion mediator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nectin-4; poliovirus receptor homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019860.2 Reference ASM223467v1 Primary Assembly

    Range
    23177899..23191208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011485575.3 → XP_011483877.1  nectin-4 isoform X1

    UniProtKB/TrEMBL
    A0A3P9MAR6
    Related
    ENSORLP00000051563.1, ENSORLT00000103538.1
    Conserved Domains (2) summary
    smart00410
    Location:30 → 128
    IG_like; Immunoglobulin like
    cl11960
    Location:143 → 238
    Ig; Immunoglobulin domain

  2. XM_004066619.4 → XP_004066667.1  poliovirus receptor homolog isoform X2

    UniProtKB/TrEMBL
    A0A3B3IAG8, A0A3P9JBS5
    Related
    ENSORLP00000038584.1, ENSORLT00000028470.2
    Conserved Domains (2) summary
    smart00410
    Location:30 → 128
    IG_like; Immunoglobulin like
    cl11960
    Location:143 → 238
    Ig; Immunoglobulin domain
Nucleotide Protein
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