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LHX5 LIM homeobox 5 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101135725, updated on 4-Apr-2025
Gene symbol
LHX5
Gene description
LIM homeobox 5
See related
EnsemblRapid:ENSGGOG00050018488
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
all
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See LHX5 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2025_04 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 10 NC_073234.2 (128858122..128867962, complement)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 12 NC_073236.1 (128583959..128593864, complement)

Chromosome 10 - NC_073234.2Genomic Context describing neighboring genes Neighboring gene serine dehydratase Neighboring gene serine dehydratase like Neighboring gene U7 small nuclear RNA Neighboring gene uncharacterized LOC129526038

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
LIM/homeobox protein Lhx5

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2025_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.1_pri Primary Assembly

Genomic

  1. NC_073234.2 Reference NHGRI_mGorGor1-v2.1_pri Primary Assembly

    Range
    128858122..128867962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004053947.5 → XP_004053995.1  LIM/homeobox protein Lhx5

    See identical proteins and their annotated locations for XP_004053995.1

    UniProtKB/TrEMBL
    G3R4V4
    Related
    ENSGGOP00050023347.1, ENSGGOT00050034466.1
    Conserved Domains (4) summary
    cd09367
    Location:5 → 56
    LIM1_Lhx1_Lhx5; The first LIM domain of Lhx1 (also known as Lim1) and Lhx5
    cd09375
    Location:64 → 119
    LIM2_Lhx1_Lhx5; The second LIM domain of Lhx1 (also known as Lim1) and Lhx5
    PHA03378
    Location:301 → 392
    PHA03378; EBNA-3B; Provisional
    pfam00046
    Location:183 → 237
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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