Format

Send to:

Choose Destination

LIG3 DNA ligase 3 [ Gorilla gorilla (western gorilla) ]

Gene ID: 101131334, updated on 12-Mar-2017
Gene symbol
LIG3
Gene description
DNA ligase 3
See related
Ensembl:ENSGGOG00000025637
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
Location:
chromosome: 5
Exon count:
22
Annotation release Status Assembly Chr Location
101 current gorGor4 (GCF_000151905.2) 5 NC_018429.2 (48312032..48336639, complement)
100 previous assembly gorGor3.1 (GCF_000151905.1) 5 NC_018429.1 (49092757..49117439, complement)

Chromosome 5 - NC_018429.2Genomic Context describing neighboring genes Neighboring gene RAD51 paralog D Neighboring gene ring finger and FYVE like domain containing E3 ubiquitin protein ligase Neighboring gene oligosaccharyltransferase complex subunit OSTC pseudogene Neighboring gene zinc finger protein 830 Neighboring gene chaperonin containing TCP1 subunit 6B

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • BER complex, organism-specific biosystem (from KEGG)
    BER complex, organism-specific biosystemStructural complex; Genetic information processing; Repair system
  • BER complex, conserved biosystem (from KEGG)
    BER complex, conserved biosystemStructural complex; Genetic information processing; Repair system
  • Base excision repair, organism-specific biosystem (from KEGG)
    Base excision repair, organism-specific biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
  • Base excision repair, conserved biosystem (from KEGG)
    Base excision repair, conserved biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...

RefSeqs of Annotated Genomes: Gorilla gorilla Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gorGor4 Primary Assembly

Genomic

  1. NC_018429.2 Reference gorGor4 Primary Assembly

    Range
    48312032..48336639 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004041932.2XP_004041980.1  DNA ligase 3 isoform X1

    UniProtKB/TrEMBL
    G3RTL5
    Related
    ENSGGOP00000019141
    Conserved Domains (6) summary
    cd07967
    Location:686824
    OBF_DNA_ligase_III; The Oligonucleotide/oligosaccharide binding (OB)-fold domain of ATP-dependent DNA ligase III is a DNA-binding module that is part of the catalytic core unit
    cd07902
    Location:468680
    Adenylation_DNA_ligase_III; Adenylation domain of DNA Ligase III
    TIGR00574
    Location:318830
    dnl1; DNA ligase I, ATP-dependent (dnl1)
    pfam00645
    Location:97179
    zf-PARP; Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
    pfam04675
    Location:264429
    DNA_ligase_A_N; DNA ligase N terminus
    pfam16759
    Location:9331004
    LIG3_BRCT; DNA ligase 3 BRCT domain
  2. XM_019027634.1XP_018883179.1  DNA ligase 3 isoform X1

    UniProtKB/TrEMBL
    G3RTL5
  3. XM_004041933.2XP_004041981.1  DNA ligase 3 isoform X2

    Conserved Domains (5) summary
    cd07967
    Location:686824
    OBF_DNA_ligase_III; The Oligonucleotide/oligosaccharide binding (OB)-fold domain of ATP-dependent DNA ligase III is a DNA-binding module that is part of the catalytic core unit
    cd07902
    Location:468680
    Adenylation_DNA_ligase_III; Adenylation domain of DNA Ligase III
    TIGR00574
    Location:318830
    dnl1; DNA ligase I, ATP-dependent (dnl1)
    pfam00645
    Location:97179
    zf-PARP; Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
    pfam04675
    Location:264429
    DNA_ligase_A_N; DNA ligase N terminus
Support Center