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COL6A3 collagen type VI alpha 3 chain [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101129379, updated on 3-Apr-2024

Summary

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Gene symbol
COL6A3
Gene description
collagen type VI alpha 3 chain
See related
Ensembl:ENSGGOG00000002468
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
44
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 11 NC_073235.2 (140015626..140106288, complement)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 2B NC_073226.1 (128492206..128582721, complement)

Chromosome 11 - NC_073235.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134756689 Neighboring gene COP9 signalosome subunit 8 Neighboring gene uncharacterized LOC129532047 Neighboring gene melanophilin Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent conferring tensile strength IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collagen alpha-3(VI) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073235.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    140015626..140106288 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055380639.2 → XP_055236614.1  collagen alpha-3(VI) chain isoform X1

    UniProtKB/TrEMBL
    G3QJ50

  2. XM_004033417.5 → XP_004033465.3  collagen alpha-3(VI) chain isoform X11

    UniProtKB/TrEMBL
    A0A2I2YTN8

  3. XM_063695310.1 → XP_063551380.1  collagen alpha-3(VI) chain isoform X10

  4. XM_055380641.2 → XP_055236616.1  collagen alpha-3(VI) chain isoform X8

  5. XM_063695308.1 → XP_063551378.1  collagen alpha-3(VI) chain isoform X7

  6. XM_063695306.1 → XP_063551376.1  collagen alpha-3(VI) chain isoform X4

  7. XM_063695305.1 → XP_063551375.1  collagen alpha-3(VI) chain isoform X3

  8. XM_063695304.1 → XP_063551374.1  collagen alpha-3(VI) chain isoform X2

  9. XM_055380642.2 → XP_055236617.1  collagen alpha-3(VI) chain isoform X12

  10. XM_063695309.1 → XP_063551379.1  collagen alpha-3(VI) chain isoform X9

  11. XM_063695307.1 → XP_063551377.1  collagen alpha-3(VI) chain isoform X6

  12. XM_055380640.2 → XP_055236615.1  collagen alpha-3(VI) chain isoform X5

    UniProtKB/TrEMBL
    G3S5Z6

  13. XM_063695312.1 → XP_063551382.1  collagen alpha-3(VI) chain isoform X14

  14. XM_063695311.1 → XP_063551381.1  collagen alpha-3(VI) chain isoform X13

Nucleotide Protein
Heading Accession and Version

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