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LOC101120653 solute carrier organic anion transporter family member 1B3 [ Ovis aries (sheep) ]

Gene ID: 101120653, updated on 7-Feb-2024

Summary

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Gene symbol
LOC101120653
Gene description
solute carrier organic anion transporter family member 1B3
See related
EnsemblRapid:ENSOARG00020000442
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Also known as
SLCO1B3
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Genomic context

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See LOC101120653 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 3 NC_056056.1 (194480772..194556139, complement)

Chromosome 3 - NC_056056.1Genomic Context describing neighboring genes Neighboring gene RecQ like helicase Neighboring gene pyridine nucleotide-disulphide oxidoreductase domain 1 Neighboring gene solute carrier organic anion transporter family member 1A2 Neighboring gene islet amyloid polypeptide Neighboring gene U6 spliceosomal RNA Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene solute carrier organic anion transporter family member 1C1 Neighboring gene phosphodiesterase 3A Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056056.1 Chromosome 3 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mutation responsible for congenital photosensitivity and hyperbilirubinemia in Southdown sheep. Posbergh CJ, et al. Am J Vet Res, 2018 May. PMID 29688779
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. a nonsynonymous mutation in Slco1b3 causes congenital photosensitivity and hyperbilirubinemia (CPH) in Southdown sheep
    Title: Mutation responsible for congenital photosensitivity and hyperbilirubinemia in Southdown sheep.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium-independent organic anion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sodium-independent organic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier organic anion transporter family member 1B3
Names
solute carrier organic anion transporter family member 1B1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056056.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    194480772..194556139 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004006802.6 → XP_004006851.2  solute carrier organic anion transporter family member 1B3

    UniProtKB/TrEMBL
    W5QGT2
    Related
    ENSOARP00020000460.1, ENSOART00020000578.2
    Conserved Domains (1) summary
    cl28910
    Location:30 → 564
    MFS; Major Facilitator Superfamily
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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