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OBSL1 obscurin like cytoskeletal adaptor 1 [ Ovis aries (sheep) ]

Gene ID: 101114594, updated on 8-Mar-2024
Gene symbol
OBSL1
Gene description
obscurin like cytoskeletal adaptor 1
See related
EnsemblRapid:ENSOARG00020015221
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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See OBSL1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 2 NC_056055.1 (221466653..221493937, complement)

Chromosome 2 - NC_056055.1Genomic Context describing neighboring genes Neighboring gene acid sensing ion channel subunit family member 4 Neighboring gene chondroitin polymerizing factor Neighboring gene transmembrane protein 198 Neighboring gene inhibin subunit alpha Neighboring gene serine/threonine kinase 11 interacting protein

Genomic Sequence:
NC_056055.1 Chromosome 2 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Ovis aries Rambouillet Genome sequencing and assembly
  • BioProject: PRJNA414087
  • Analysis date: Thu Jan 09 10:41:41 2025

Related articles in PubMed

  1. Molecular basis of a new ovine model for human 3M syndrome-2. Woolley SA, et al. BMC Genet, 2020 Sep 15. PMID 32933480, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Molecular basis of a new ovine model for human 3M syndrome-2.
    Title: Molecular basis of a new ovine model for human 3M syndrome-2.
Submit: New GeneRIF Correction

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
obscurin-like protein 1
Names
obscurin like 1

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056055.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    221466653..221493937 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042244294.1 → XP_042100228.1  obscurin-like protein 1 isoform X3

    UniProtKB/TrEMBL
    W5QG85
    Conserved Domains (5) summary
    smart00408
    Location:912 → 969
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:134 → 224
    IG; Immunoglobulin
    smart00410
    Location:1632 → 1709
    IG_like; Immunoglobulin like
    cd00063
    Location:516 → 600
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:1372 → 1376
    Ig; Ig strand B [structural motif]

  2. XM_042244293.1 → XP_042100227.1  obscurin-like protein 1 isoform X1

    UniProtKB/TrEMBL
    W5QG85
    Conserved Domains (5) summary
    smart00408
    Location:912 → 969
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:134 → 224
    IG; Immunoglobulin
    smart00410
    Location:1724 → 1801
    IG_like; Immunoglobulin like
    cd00063
    Location:516 → 600
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:1285 → 1289
    Ig; Ig strand B [structural motif]

  3. XM_027965227.3 → XP_027821028.1  obscurin-like protein 1 isoform X4

    UniProtKB/TrEMBL
    W5QG85
    Related
    ENSOARP00020019482.2, ENSOART00020023495.2

  4. XM_027965226.3 → XP_027821027.1  obscurin-like protein 1 isoform X2

    UniProtKB/TrEMBL
    W5QG85
    Related
    ENSOARP00020019428.2, ENSOART00020023429.2

  5. XM_027965228.2 → XP_027821029.1  obscurin-like protein 1 isoform X5

    UniProtKB/TrEMBL
    W5QG85

  6. XM_027965229.3 → XP_027821030.1  obscurin-like protein 1 isoform X6

    Related
    ENSOARP00020019695.1, ENSOART00020023756.2
Nucleotide Protein Strain
Heading Accession and Version

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