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STX18 syntaxin 18 [ Felis catus (domestic cat) ]

Gene ID: 101088331, updated on 16-Aug-2022

Summary

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Official Symbol
STX18
Official Full Name
syntaxin 18
Primary source
VGNC:VGNC:65809
See related
EnsemblRapid:ENSFCTG00005026291
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See STX18 in Genome Data Viewer
Location:
chromosome: B1
Exon count:
21
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) B1 NC_058371.1 (198813382..198944810, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) B1 NC_018726.3 (201625581..201760430, complement)

Chromosome B1 - NC_058371.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123385120 Neighboring gene Ly1 antibody reactive Neighboring gene zinc finger and BTB domain containing 49 Neighboring gene neuronal vesicle trafficking associated 1 Neighboring gene FMR1 autosomal homolog 1-like Neighboring gene M-phase phosphoprotein 6-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and comparative genomic analysis of 1227 Felis catus cDNA sequences enriched for developmental, clinical and nutritional phenotypes. Irizarry KJ, et al. BMC Genomics, 2012 Jan 18. PMID 22257742, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
syntaxin-18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058371.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    198813382..198944810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045056595.1 → XP_044912530.1  syntaxin-18 isoform X2

    Conserved Domains (1) summary
    cd15850
    Location:165 → 223
    SNARE_syntaxin18; SNARE motif, subgroup Qa

  2. XM_045056594.1 → XP_044912529.1  syntaxin-18 isoform X1

    Conserved Domains (1) summary
    cd15850
    Location:165 → 223
    SNARE_syntaxin18; SNARE motif, subgroup Qa

  3. XM_003985508.6 → XP_003985557.1  syntaxin-18 isoform X3

    UniProtKB/TrEMBL
    M3XAH6
    Related
    ENSFCTP00005052830.1, ENSFCTT00005075082.1
    Conserved Domains (2) summary
    cd15850
    Location:246 → 304
    SNARE_syntaxin18; SNARE motif, subgroup Qa
    pfam10496
    Location:4 → 96
    Syntaxin-18_N; SNARE-complex protein Syntaxin-18 N-terminus

RNA

  1. XR_006597242.1 RNA Sequence

  2. XR_006597249.1 RNA Sequence

  3. XR_006597248.1 RNA Sequence

  4. XR_006597243.1 RNA Sequence

  5. XR_006597246.1 RNA Sequence

  6. XR_006597247.1 RNA Sequence

  7. XR_006597244.1 RNA Sequence

  8. XR_006597245.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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