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plcb2 phospholipase C, beta 2 [ Takifugu rubripes (torafugu) ]

Gene ID: 101076025, updated on 8-Mar-2024

Summary

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Gene symbol
plcb2
Gene description
phospholipase C, beta 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
zebrafish all
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Genomic context

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See plcb2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
32
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 2 NC_042286.1 (10662218..10675352, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 2 NC_018891.1 (8558550..8570930, complement)

Chromosome 2 - NC_042286.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase PAK 4 Neighboring gene ankyrin repeat domain 63 Neighboring gene coiled-coil domain containing 9B Neighboring gene InaF motif containing 2 Neighboring gene uncharacterized LOC105418112

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042286.1 Reference fTakRub1.2 Primary Assembly

    Range
    10662218..10675352 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029833020.1 → XP_029688880.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2

    Conserved Domains (7) summary
    cd00275
    Location:668 → 787
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd15898
    Location:149 → 178
    EFh_PI-PLC; EF-hand motif [structural motif]
    cl28895
    Location:149 → 297
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
    pfam06631
    Location:1004 → 1043
    DUF1154; Protein of unknown function (DUF1154)
    pfam08703
    Location:1075 → 1227
    PLC-beta_C; PLC-beta C terminal
    pfam17787
    Location:12 → 141
    PH_14; PH domain
    cl14615
    Location:310 → 635
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
Nucleotide Protein
Heading Accession and Version

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