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gata1a GATA binding protein 1a [ Takifugu rubripes (torafugu) ]

Gene ID: 101069919, updated on 4-Mar-2026
Gene symbol
gata1a
Gene description
GATA binding protein 1a
See related
Ensembl:ENSTRUG00000012781
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
all
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Try the new Transcripts and proteins table
See gata1a in Genome Data Viewer
Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2026_03 current fTakRub1.3 (GCF_901000725.3) 19 NC_042303.1 (16760941..16763630, complement)

Chromosome 19 - NC_042303.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115246850 Neighboring gene activity-dependent neuroprotector homeobox a Neighboring gene bcl-2-like protein 1 Neighboring gene host cell factor C1a Neighboring gene opsin 1 (cone pigments), short-wave-sensitive 2

Genomic Sequence:
NC_042303.1 Chromosome 19 Reference fTakRub1.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
GATA binding protein 1a

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RefSeqs of Annotated Genomes: GCF_901000725.3-RS_2026_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.3

Genomic

  1. NC_042303.1 Reference fTakRub1.3

    Range
    16760941..16763630 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011614329.2 → XP_011612631.1  GATA binding protein 1a

    See identical proteins and their annotated locations for XP_011612631.1

    UniProtKB/TrEMBL
    H2U5Y9
    Conserved Domains (1) summary
    cd00202
    Location:293 → 342
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

  2. XM_003973671.3 → XP_003973720.1  GATA binding protein 1a

    See identical proteins and their annotated locations for XP_003973720.1

    UniProtKB/TrEMBL
    H2U5Y9
    Related
    ENSTRUP00000032355.1, ENSTRUT00000032479.3
    Conserved Domains (1) summary
    cd00202
    Location:293 → 342
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

  3. XM_029827180.1 → XP_029683040.1  GATA binding protein 1a

    UniProtKB/TrEMBL
    H2U5Y9
    Conserved Domains (1) summary
    cd00202
    Location:293 → 342
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
Nucleotide Protein
Heading Accession and Version

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