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NADK2-AS1 NADK2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101056700, updated on 10-Oct-2023

Summary

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Official Symbol
NADK2-AS1provided by HGNC
Official Full Name
NADK2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:41143
See related
Ensembl:ENSG00000245711 AllianceGenome:HGNC:41143
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NADKD1-AS1
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Genomic context

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Location:
5p13.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (36221055..36221901)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (36469377..36470223)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (36221157..36222003)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene LMBR1 domain containing 2 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:36151273-36152256 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22476 Neighboring gene RNA, U6 small nuclear 1305, pseudogene Neighboring gene microRNA 580 Neighboring gene S-phase kinase associated protein 2 Neighboring gene NAD kinase 2, mitochondrial Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15972 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22477 Neighboring gene uncharacterized LOC124900962 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22478 Neighboring gene RAN binding protein 3 like Neighboring gene NANOG hESC enhancer GRCh37_chr5:36359316-36360151 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr5:36417632-36418831 Neighboring gene Sharpr-MPRA regulatory region 12809 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr5:36422736-36423935 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:36442158-36443357 Neighboring gene RNA, 5S ribosomal pseudogene 181

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • NADKD1 antisense RNA 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_170324.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC008942
    Related
    ENST00000501794.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    36221055..36221901
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    36469377..36470223
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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