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RORA-AS2 RORA antisense RNA 2 [ Homo sapiens (human) ]

Gene ID: 100996876, updated on 23-Nov-2021

Summary

Official Symbol
RORA-AS2provided by HGNC
Official Full Name
RORA antisense RNA 2provided by HGNC
Primary source
HGNC:HGNC:51411
See related
Ensembl:ENSG00000259482
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 4.2) See more
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Genomic context

See RORA-AS2 in Genome Data Viewer
Location:
15q22.2
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (60681569..60687249)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (60973768..60979448)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene RORA antisense RNA 1 Neighboring gene RAR related orphan receptor A Neighboring gene CYCS pseudogene 38 Neighboring gene uncharacterized LOC105370846 Neighboring gene uncharacterized LOC105370844 Neighboring gene RNA, 5S ribosomal pseudogene 397

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_120318.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC009560, AW629108, BX095512, DB033761, DB041245, DB058680
  2. NR_120319.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate internal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AC009560, AW629108, BX095512, DB041245, DB058680
    Related
    ENST00000663342.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    60681569..60687249
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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