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TCP11X2 t-complex 11 family, X-linked 2 [ Homo sapiens (human) ]

Gene ID: 100996648, updated on 5-Jan-2022

Summary

Official Symbol
TCP11X2provided by HGNC
Official Full Name
t-complex 11 family, X-linked 2provided by HGNC
Primary source
HGNC:HGNC:48335
See related
Ensembl:ENSG00000215029
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to be involved in protein kinase A signaling and regulation of sperm capacitation. Predicted to be active in acrosomal vesicle and sperm flagellum. [provided by Alliance of Genome Resources, Nov 2021]
Expression
Biased expression in testis (RPKM 1.7), lung (RPKM 0.3) and 2 other tissues See more
Orthologs
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Genomic context

See TCP11X2 in Genome Data Viewer
Location:
Xq22.1
Exon count:
10
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (102460315..102471812, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (101715240..101726732, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 14 pseudogene Neighboring gene nuclear RNA export factor 2 Neighboring gene nuclear RNA export factor 2B Neighboring gene thymosin beta 15A Neighboring gene forkhead box N3 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Potential readthrough

Included gene: NXF2B

Homology

Clone Names

  • FLJ32823, FLJ35991, FLJ97841, DKFZp434B1612, DKFZp686N2036

General protein information

Preferred Names
T-complex protein 11 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001277423.2NP_001264352.1  T-complex protein 11 homolog

    See identical proteins and their annotated locations for NP_001264352.1

    Status: VALIDATED

    Source sequence(s)
    AC235565
    Consensus CDS
    CCDS59530.1
    UniProtKB/Swiss-Prot
    Q5H9J9
    Related
    ENSP00000496057.1
    Conserved Domains (1) summary
    pfam05794
    Location:1388
    Tcp11; T-complex protein 11

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    102460315..102471812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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