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LINC01981 long intergenic non-protein coding RNA 1981 [ Homo sapiens (human) ]

Gene ID: 100996624, updated on 13-May-2022

Summary

Official Symbol
LINC01981provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1981provided by HGNC
Primary source
HGNC:HGNC:52809
See related
Ensembl:ENSG00000229243 AllianceGenome:HGNC:52809
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.2) See more
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Genomic context

See LINC01981 in Genome Data Viewer
Location:
3p24.1
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (27830886..27834136, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (27832990..27836240, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (27872377..27875627, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2084 Neighboring gene eomesodermin Neighboring gene long intergenic non-protein coding RNA 1980 Neighboring gene VISTA enhancer hs1557 Neighboring gene long intergenic non-protein coding RNA 1967

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_132438.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA719043, AC098973, BC037254
    Related
    ENST00000432163.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    27830886..27834136 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    27832990..27836240 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)