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NAMA non-protein coding RNA, associated with MAP kinase pathway and growth arrest [ Homo sapiens (human) ]

Gene ID: 100996569, updated on 23-Nov-2021

Summary

Official Symbol
NAMAprovided by HGNC
Official Full Name
non-protein coding RNA, associated with MAP kinase pathway and growth arrestprovided by HGNC
Primary source
HGNC:HGNC:42408
See related
Ensembl:ENSG00000271086
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See NAMA in Genome Data Viewer
Location:
9q22.33
Exon count:
10
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (99355340..99375257, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (102117622..102137539, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene RN7SK pseudogene 225 Neighboring gene keratin 8 pseudogene 11 Neighboring gene uncharacterized LOC107987011 Neighboring gene uncharacterized LOC107987012

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Genetics of callous-unemotional behavior in children.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_102270.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    DQ673922, DQ673923, DQ673925, DQ673929, DQ673950, DQ673963
    Related
    ENST00000604258.5
  2. NR_102271.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks four internal exons, compared to variant 1.
    Source sequence(s)
    DQ673923, DQ673929, DQ673950, DQ673963

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    99355340..99375257 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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