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POTEB POTE ankyrin domain family member B [ Homo sapiens (human) ]

Gene ID: 100996331, updated on 11-Jun-2021

Summary

Official Symbol
POTEBprovided by HGNC
Official Full Name
POTE ankyrin domain family member Bprovided by HGNC
Primary source
HGNC:HGNC:33734
See related
Ensembl:ENSG00000233917 MIM:608912
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
A26B1; POTE15; POTEB2; CT104.5; POTE-15
Expression
Restricted expression toward testis (RPKM 5.8) See more
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Genomic context

See POTEB in Genome Data Viewer
Location:
15q11.2
Exon count:
12
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (21846329..21877735, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (22051853..22083259, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105379207 Neighboring gene microRNA 3118-4 Neighboring gene RNA, U6 small nuclear 631, pseudogene Neighboring gene vomeronasal 1 receptor 62 pseudogene Neighboring gene vomeronasal 1 receptor 63 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General protein information

Preferred Names
POTE ankyrin domain family member B
Names
ANKRD26-like family B, member 1
POTE ankyrin domain family member B2
cancer/testis antigen family 104, member 5
prostate, ovary, testis-expressed protein on chromosome 15
protein expressed in prostate, ovary, testis, and placenta 15

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001277304.2NP_001264233.1  POTE ankyrin domain family member B

    See identical proteins and their annotated locations for NP_001264233.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer variant and encodes the supported protein.
    Source sequence(s)
    AC183089
    Consensus CDS
    CCDS59250.1
    UniProtKB/Swiss-Prot
    H3BUK9
    UniProtKB/TrEMBL
    A0A0A6YYL3
    Related
    ENSP00000457689.2, ENST00000439682.2
    Conserved Domains (4) summary
    cd00204
    Location:130255
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:201232
    ANK; ANK repeat [structural motif]
    pfam14915
    Location:489542
    CCDC144C; CCDC144C protein coiled-coil region
    cl25732
    Location:412542
    SMC_N; RecF/RecN/SMC N terminal domain

RNA

  1. NR_102391.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks two internal exons, compared to variant 1. This variant is represented as non-coding because the use of the expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AC183089
    Related
    ENST00000435397.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    21846329..21877735 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006720355.3XP_006720418.1  POTE ankyrin domain family member B isoform X1

    See identical proteins and their annotated locations for XP_006720418.1

    Conserved Domains (4) summary
    cd00204
    Location:130255
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:140232
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:106156
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:201232
    ANK; ANK repeat [structural motif]
  2. XM_017021858.1XP_016877347.1  POTE ankyrin domain family member B isoform X3

  3. XM_011543794.2XP_011542096.1  POTE ankyrin domain family member B isoform X2

    See identical proteins and their annotated locations for XP_011542096.1

    Conserved Domains (4) summary
    cd00204
    Location:130255
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:140232
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:106156
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:201232
    ANK; ANK repeat [structural motif]

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_021160017.1 Reference GRCh38.p13 PATCHES

    Range
    3023460..3054807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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