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AGER advanced glycosylation end-product specific receptor [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100988780, updated on 6-Jun-2025
Gene symbol
AGER
Gene description
advanced glycosylation end-product specific receptor
See related
EnsemblRapid:ENSPPAG00050028326 RGD:11732391
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See AGER in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 5 NC_073254.2 (46644045..46647812, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 6 NC_073255.1 (42605525..42609148, complement)

Chromosome 5 - NC_073254.2Genomic Context describing neighboring genes Neighboring gene EGF like domain multiple 8 Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase 1 Neighboring gene ring finger protein 5 Neighboring gene PBX homeobox 2 Neighboring gene G protein signaling modulator 3 Neighboring gene notch receptor 4

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables laminin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of p38MAPK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
advanced glycosylation end product-specific receptor

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073254.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    46644045..46647812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063605261.1 → XP_063461331.1  advanced glycosylation end product-specific receptor isoform X8

  2. XM_003829764.6 → XP_003829812.2  advanced glycosylation end product-specific receptor isoform X9

    Conserved Domains (4) summary
    smart00409
    Location:55 → 148
    IG; Immunoglobulin
    pfam08205
    Location:155 → 250
    C2-set_2; CD80-like C2-set immunoglobulin domain
    cd00096
    Location:184 → 189
    Ig; Ig strand C [structural motif]
    cl11960
    Location:271 → 351
    Ig; Immunoglobulin domain

  3. XM_024929250.4 → XP_024785018.1  advanced glycosylation end product-specific receptor isoform X4

    UniProtKB/TrEMBL
    A0A2R9A146
    Conserved Domains (3) summary
    smart00410
    Location:55 → 148
    IG_like; Immunoglobulin like
    pfam08205
    Location:155 → 250
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13927
    Location:270 → 335
    Ig_3; Immunoglobulin domain

  4. XM_003829763.6 → XP_003829811.1  advanced glycosylation end product-specific receptor isoform X3

    See identical proteins and their annotated locations for XP_003829811.1

    UniProtKB/TrEMBL
    A0A2R8ZZZ3
    Related
    ENSPPAP00050039873.1, ENSPPAT00050060694.1
    Conserved Domains (4) summary
    cd00096
    Location:65 → 142
    Ig; Immunoglobulin domain
    smart00408
    Location:282 → 337
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:275 → 346
    IG_like; Immunoglobulin like
    pfam08205
    Location:155 → 250
    C2-set_2; CD80-like C2-set immunoglobulin domain

  5. XM_008955137.5 → XP_008953385.1  advanced glycosylation end product-specific receptor isoform X6

    See identical proteins and their annotated locations for XP_008953385.1

    UniProtKB/TrEMBL
    A0A2R8ZZZ5
    Conserved Domains (4) summary
    smart00408
    Location:282 → 337
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:275 → 346
    IG_like; Immunoglobulin like
    pfam08205
    Location:155 → 250
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13895
    Location:54 → 148
    Ig_2; Immunoglobulin domain

  6. XM_063605260.1 → XP_063461330.1  advanced glycosylation end product-specific receptor isoform X7

  7. XM_063605258.1 → XP_063461328.1  advanced glycosylation end product-specific receptor isoform X2

    UniProtKB/TrEMBL
    A0A2R9A146

  8. XM_063605257.1 → XP_063461327.1  advanced glycosylation end product-specific receptor isoform X1

    UniProtKB/TrEMBL
    A0A2R8ZZZ3
    Related
    ENSPPAP00050039830.1, ENSPPAT00050060638.1

  9. XM_063605259.1 → XP_063461329.1  advanced glycosylation end product-specific receptor isoform X5

    UniProtKB/TrEMBL
    A0A2R8ZZZ5
Nucleotide Protein
Heading Accession and Version

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