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AMOTL1 angiomotin like 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100981618, updated on 6-May-2018

Summary

Gene symbol
AMOTL1
Gene description
angiomotin like 1
See related
Ensembl:ENSPPAG00000036699
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs

Genomic context

See AMOTL1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
103 current panpan1.1 (GCF_000258655.2) 11 NC_027879.1 (93268860..93413197)
101 previous assembly panpan1 (GCF_000258655.1) Unplaced Scaffold NW_003870589.1 (19462305..19606643, complement)

Chromosome 11 - NC_027879.1Genomic Context describing neighboring genes Neighboring gene fucosyltransferase 4 Neighboring gene piwi like RNA-mediated gene silencing 4 Neighboring gene hsc70-interacting protein pseudogene Neighboring gene CWC15 spliceosome associated protein homolog

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Tight junction, organism-specific biosystem (from KEGG)
    Tight junction, organism-specific biosystemTight junctions (TJs) are essential for establishing a selectively permeable barrier to diffusion through the paracellular space between neighboring cells. TJs are composed of at least three types of...
  • Tight junction, conserved biosystem (from KEGG)
    Tight junction, conserved biosystemTight junctions (TJs) are essential for establishing a selectively permeable barrier to diffusion through the paracellular space between neighboring cells. TJs are composed of at least three types of...

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pan paniscus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference panpan1.1 Primary Assembly

Genomic

  1. NC_027879.1 Reference panpan1.1 Primary Assembly

    Range
    93268860..93413197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008953812.2XP_008952060.1  angiomotin-like protein 1 isoform X2

    See identical proteins and their annotated locations for XP_008952060.1

    Related
    ENSPPAP00000027295.1, ENSPPAT00000050135.1
    Conserved Domains (2) summary
    pfam12240
    Location:519721
    Angiomotin_C; Angiomotin C terminal
    cl12013
    Location:381553
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
  2. XM_008953811.3XP_008952059.1  angiomotin-like protein 1 isoform X1

    Related
    ENSPPAP00000027312.1, ENSPPAT00000050152.1
    Conserved Domains (2) summary
    pfam12240
    Location:620822
    Angiomotin_C; Angiomotin C terminal
    cl12013
    Location:482654
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
  3. XM_008953813.3XP_008952061.1  angiomotin-like protein 1 isoform X2

    See identical proteins and their annotated locations for XP_008952061.1

    Related
    ENSPPAP00000027315.1, ENSPPAT00000050155.1
    Conserved Domains (2) summary
    pfam12240
    Location:519721
    Angiomotin_C; Angiomotin C terminal
    cl12013
    Location:381553
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
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