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NR1I2 nuclear receptor subfamily 1 group I member 2 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100971952, updated on 2-May-2018

Summary

Gene symbol
NR1I2
Gene description
nuclear receptor subfamily 1 group I member 2
See related
Ensembl:ENSPPAG00000028796
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs

Genomic context

See NR1I2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
103 current panpan1.1 (GCF_000258655.2) 3 NC_027871.1 (123815135..123853129)
101 previous assembly panpan1 (GCF_000258655.1) Unplaced Scaffold NW_003870557.1 (15819166..15857160)

Chromosome 3 - NC_027871.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase copper chaperone Neighboring gene uncharacterized LOC106634602 Neighboring gene MYCBP associated and testis expressed 1 Neighboring gene prohibitin pseudogene Neighboring gene glycogen synthase kinase 3 beta Neighboring gene presenilins-associated rhomboid-like protein, mitochondrial Neighboring gene G protein-coupled receptor 156

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
nuclear receptor subfamily 1 group I member 2

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pan paniscus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference panpan1.1 Primary Assembly

Genomic

  1. NC_027871.1 Reference panpan1.1 Primary Assembly

    Range
    123815135..123853129
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008950458.1XP_008948706.1  nuclear receptor subfamily 1 group I member 2 isoform X1

    Related
    ENSPPAP00000011192.1, ENSPPAT00000033847.1
    Conserved Domains (2) summary
    cd06934
    Location:88373
    NR_LBD_PXR_like; The ligand binding domain of xenobiotic receptors:pregnane X receptor and constitutive androstane receptor
    cl02596
    Location:172
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  2. XM_008950460.1XP_008948708.1  nuclear receptor subfamily 1 group I member 2 isoform X3

    Conserved Domains (2) summary
    cd06934
    Location:88336
    NR_LBD_PXR_like; The ligand binding domain of xenobiotic receptors:pregnane X receptor and constitutive androstane receptor
    cl02596
    Location:172
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  3. XM_008950459.2XP_008948707.1  nuclear receptor subfamily 1 group I member 2 isoform X2

    Conserved Domains (2) summary
    cl02596
    Location:172
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
    cl11397
    Location:88341
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
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