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PSMC1 proteasome 26S subunit, ATPase 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100967558, updated on 8-Mar-2024

Summary

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Gene symbol
PSMC1
Gene description
proteasome 26S subunit, ATPase 1
See related
Ensembl:ENSPPAG00000029609
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See PSMC1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 15 NC_073264.2 (91400672..91416861)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 14 NC_073263.1 (90617193..90633367)

Chromosome 15 - NC_073264.2Genomic Context describing neighboring genes Neighboring gene tyrosyl-DNA phosphodiesterase 1 Neighboring gene potassium two pore domain channel subfamily K member 13 Neighboring gene glutaredoxin-1-like Neighboring gene NRDE-2, necessary for RNA interference, domain containing Neighboring gene large ribosomal subunit protein eL21-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome-activating activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proteasome regulatory particle, base subcomplex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
26S proteasome regulatory subunit 4
Names
proteasome (prosome, macropain) 26S subunit, ATPase, 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073264.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    91400672..91416861
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008958185.5 → XP_008956433.1  26S proteasome regulatory subunit 4

    See identical proteins and their annotated locations for XP_008956433.1

    UniProtKB/TrEMBL
    A0A2R9A6J0, A0A2R9BJI0
    Related
    ENSPPAP00000012908.1
    Conserved Domains (1) summary
    PTZ00361
    Location:1 → 440
    PTZ00361; 26 proteosome regulatory subunit 4-like protein; Provisional
Nucleotide Protein
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