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SRCAP Snf2 related CREBBP activator protein [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100941787, updated on 8-Mar-2024

Summary

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Gene symbol
SRCAP
Gene description
Snf2 related CREBBP activator protein
See related
Ensembl:ENSOGAG00000034739
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852491.1 (7473530..7518178)

NW_003852491.1Genomic Context describing neighboring genes Neighboring gene proline rich 14 Neighboring gene fibrosin Neighboring gene uncharacterized LOC100964269 Neighboring gene small nucleolar RNA SNORA30/SNORA37 family Neighboring gene transmembrane protein 265 Neighboring gene phosphorylase kinase catalytic subunit gamma 2 Neighboring gene cilia and flagella associated protein 119

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852491 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Swr1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
helicase SRCAP

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852491.1 Reference OtoGar3

    Range
    7473530..7518178
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012808873.2 → XP_012664327.1  helicase SRCAP

    UniProtKB/TrEMBL
    H0XQT0
    Related
    ENSOGAP00000018472.1, ENSOGAT00000028407.1
    Conserved Domains (5) summary
    cd00046
    Location:645 → 784
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam00176
    Location:628 → 914
    SNF2_N; SNF2 family N-terminal domain
    pfam00271
    Location:2053 → 2167
    Helicase_C; Helicase conserved C-terminal domain
    pfam07529
    Location:127 → 196
    HSA; HSA
    cl23750
    Location:2242 → 2363
    vATP-synt_E; ATP synthase (E/31 kDa) subunit
Nucleotide Protein
Heading Accession and Version

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