U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100900229 extensin [ Galendromus occidentalis (western predatory mite) ]

Gene ID: 100900229, updated on 1-Aug-2024
Gene symbol
LOC100900229
Gene description
extensin
See related
EnsemblRapid:LOC100900229
Gene type
protein coding
RefSeq status
MODEL
Organism
Galendromus occidentalis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Mesostigmata; Gamasina; Phytoseioidea; Phytoseiidae; Typhlodrominae; Galendromus
Try the new Gene page
Try the new Transcripts and proteins table
See LOC100900229 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Mocc_1.0 (GCF_000255335.1) Unplaced Scaffold NW_003803370.1 (171879..173749, complement)

NW_003803370.1Genomic Context describing neighboring genes Neighboring gene protein prickle Neighboring gene homeobox protein B-H1-like Neighboring gene actin, clone 403 Neighboring gene dimethylaniline monooxygenase [N-oxide-forming] 5

Genomic Sequence:
NW_003803370 Unplaced Scaffold Reference Mocc_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
extensin
Names
brain-specific homeobox protein homolog

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Galendromus occidentalis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mocc_1.0 Primary Assembly

Genomic

  1. NW_003803370.1 Reference Mocc_1.0 Primary Assembly

    Range
    171879..173749 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029112950.1 → XP_028968783.1  extensin

    UniProtKB/TrEMBL
    A0AAJ7SHC4
    Related
    XP_028968783.1, XM_029112950.1
    Conserved Domains (3) summary
    pfam05887
    Location:203 → 275
    Trypan_PARP; Procyclic acidic repetitive protein (PARP)
    PHA03247
    Location:139 → 294
    PHA03247; large tegument protein UL36; Provisional
    pfam01607
    Location:362 → 408
    CBM_14; Chitin binding Peritrophin-A domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases