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TRERNA1 translation regulatory long non-coding RNA 1 [ Homo sapiens (human) ]

Gene ID: 100887755, updated on 23-Nov-2021

Summary

Official Symbol
TRERNA1provided by HGNC
Official Full Name
translation regulatory long non-coding RNA 1provided by HGNC
Primary source
HGNC:HGNC:44307
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
treRNA; LINC00651
Expression
Low expression observed in reference dataset See more
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Genomic context

See TRERNA1 in Genome Data Viewer
Location:
20q13.13
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 20 NC_000020.11 (50040707..50041629, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (48657244..48658166, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene snail family transcriptional repressor 1 Neighboring gene uncharacterized LOC105372654 Neighboring gene uncharacterized LOC105372655 Neighboring gene PEDS1-UBE2V1 readthrough Neighboring gene ubiquitin conjugating enzyme E2 V1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Other Names

  • long intergenic non-protein coding RNA 651
  • ncRNA-a7
  • noncoding RNA-activating 7
  • translational regulatory long non-coding RNA

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_051976.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AI968488, AL121712, BX118093

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p13 Primary Assembly

    Range
    50040707..50041629 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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