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PTCSC3 papillary thyroid carcinoma susceptibility candidate 3 [ Homo sapiens (human) ]

Gene ID: 100886964, updated on 25-Jan-2022

Summary

Official Symbol
PTCSC3provided by HGNC
Official Full Name
papillary thyroid carcinoma susceptibility candidate 3provided by HGNC
Primary source
HGNC:HGNC:43959
See related
MIM:614821; AllianceGenome:HGNC:43959
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward thyroid (RPKM 7.9) See more
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Genomic context

See PTCSC3 in Genome Data Viewer
Location:
14q13.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 14 NC_000014.9 (36135710..36176651, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (36604916..36645857, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370452 Neighboring gene interleukin enhancer binding factor 2 pseudogene 2 Neighboring gene long intergenic non-protein coding RNA 609 Neighboring gene uncharacterized LOC105370451 Neighboring gene RN7SK pseudogene 21 Neighboring gene uncharacterized LOC107984003

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Other Names

  • papillary thyroid carcinoma susceptibility candidate 3 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_049735.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JN689234

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p13 Primary Assembly

    Range
    36135710..36176651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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