Format

Send to:

Choose Destination

SLC9A9-AS1 SLC9A9 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100885796, updated on 12-Oct-2019

Summary

Official Symbol
SLC9A9-AS1provided by HGNC
Official Full Name
SLC9A9 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40928
See related
Ensembl:ENSG00000240012
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more

Genomic context

See SLC9A9-AS1 in Genome Data Viewer
Location:
3q24
Exon count:
4
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (143342246..143347071)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (143061088..143065913)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374137 Neighboring gene PBX homeobox 2 pseudogene 1 Neighboring gene solute carrier family 9 member A9 Neighboring gene glyceraldehyde 3 phosphate dehydrogenase pseudogene 47 Neighboring gene ST13, Hsp70 interacting protein pseudogene 15

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_048544.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC131210
    Related
    ENST00000479030.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

    Range
    143342246..143347071
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center