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IFNG-AS1 IFNG antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100885789, updated on 25-Jan-2022

Summary

Official Symbol
IFNG-AS1provided by HGNC
Official Full Name
IFNG antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:43910
See related
Ensembl:ENSG00000255733 AllianceGenome:HGNC:43910
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NEST; Tmevpg1; GS1-410F4.2
Expression
Biased expression in lymph node (RPKM 3.8), appendix (RPKM 1.7) and 7 other tissues See more
Orthologs
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Genomic context

See IFNG-AS1 in Genome Data Viewer
Location:
12q15
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (67989445..68021327)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (68383225..68415107)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984531 Neighboring gene uncharacterized LOC107984526 Neighboring gene long intergenic non-protein coding RNA 1479 Neighboring gene ribosomal protein L39 pseudogene 28 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene 70 Neighboring gene 39S ribosomal protein L21, mitochondrial pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Homology

Other Names

  • IFNG antisense RNA 1 (non-protein coding)
  • LincR-Ifng-3'AS
  • Theiler's murine encephalomyelitis virus persistence candidate gene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_104124.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC005294, AK124066, BG756823
  2. NR_104125.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate internal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AC005294, AK124066
    Related
    ENST00000538665.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    67989445..68021327
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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