Format

Send to:

Choose Destination

HOXB-AS1 HOXB cluster antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100874362, updated on 23-Nov-2021

Summary

Official Symbol
HOXB-AS1provided by HGNC
Official Full Name
HOXB cluster antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:43744
See related
Ensembl:ENSG00000230148 MIM:618066
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HOXB3OS
Expression
Broad expression in fat (RPKM 17.1), colon (RPKM 6.0) and 20 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See HOXB-AS1 in Genome Data Viewer
Location:
17q21.32
Exon count:
7
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (48544351..48551241)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (46621713..46628603)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene homeobox B1 Neighboring gene Sharpr-MPRA regulatory region 4554 Neighboring gene homeobox B2 Neighboring gene homeobox B3 Neighboring gene HOXB cluster antisense RNA 2 Neighboring gene homeobox B4

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • HOXB cluster antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_102279.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC103702, AI822042, BF875734
    Related
    ENST00000435312.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    48544351..48551241
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center