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PPP2R2B-IT1 PPP2R2B intronic transcript 1 [ Homo sapiens (human) ]

Gene ID: 100874361, updated on 25-Jan-2022

Summary

Official Symbol
PPP2R2B-IT1provided by HGNC
Official Full Name
PPP2R2B intronic transcript 1provided by HGNC
Primary source
HGNC:HGNC:42984
See related
Ensembl:ENSG00000249553 AllianceGenome:HGNC:42984
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See PPP2R2B-IT1 in Genome Data Viewer
Location:
5q32
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (146914207..146919506, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (146293770..146299069, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene protein phosphatase 2 regulatory subunit Bbeta Neighboring gene uncharacterized LOC107986461 Neighboring gene protein phosphatase 2 regulatory subunit Bbeta repeat instability region Neighboring gene uncharacterized LOC105378214 Neighboring gene STK32A antisense RNA 1 Neighboring gene serine/threonine kinase 32A Neighboring gene dihydropyrimidinase like 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • PPP2R2B intronic transcript 1 (non-protein coding)

Clone Names

  • AC008728.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_047115.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC011386
    Related
    ENST00000505921.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    146914207..146919506 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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