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GPC5-IT1 GPC5 intronic transcript 1 [ Homo sapiens (human) ]

Gene ID: 100874293, updated on 8-Apr-2022

Summary

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Official Symbol
GPC5-IT1provided by HGNC
Official Full Name
GPC5 intronic transcript 1provided by HGNC
Primary source
HGNC:HGNC:41340
See related
AllianceGenome:HGNC:41340
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See GPC5-IT1 in Genome Data Viewer
Location:
13q31.3
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (92484092..92510320)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene glypican 5 Neighboring gene fatty acid binding protein 5 pseudogene 4 Neighboring gene GPC5 antisense RNA 2 Neighboring gene uncharacterized LOC124903190 Neighboring gene microRNA 548as Neighboring gene uncharacterized LOC105370315

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000013.11 Chromosome 13 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

General gene information

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Other Names

  • GPC5 intronic transcript 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    92484092..92510320
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007063834.1 RNA Sequence

  2. XR_007063833.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases