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NTM-IT NTM intronic transcript [ Homo sapiens (human) ]

Gene ID: 100874281, updated on 10-Dec-2019

Summary

Official Symbol
NTM-ITprovided by HGNC
Official Full Name
NTM intronic transcriptprovided by HGNC
Primary source
HGNC:HGNC:41437
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NTM-IT3
Expression
Low expression observed in reference dataset See more

Genomic context

See NTM-IT in Genome Data Viewer
Location:
11q25
Exon count:
3
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (132284302..132288459)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (132154196..132158353)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene neurotrimin Neighboring gene uncharacterized LOC107984413 Neighboring gene VISTA enhancer hs335 Neighboring gene opioid binding protein/cell adhesion molecule like Neighboring gene uncharacterized LOC105369580 Neighboring gene Sharpr-MPRA regulatory region 13397

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • NTM intronic transcript (non-protein coding)
  • NTM intronic transcript 3 (non-protein coding)

Clone Names

  • AP004248.4

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046820.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP004248

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    132284302..132288459
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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