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ZNRF3-AS1 ZNRF3 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100874123, updated on 13-May-2022

Summary

Official Symbol
ZNRF3-AS1provided by HGNC
Official Full Name
ZNRF3 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:41927
See related
Ensembl:ENSG00000177993 AllianceGenome:HGNC:41927
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See ZNRF3-AS1 in Genome Data Viewer
Location:
22q12.1
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (29024999..29031476, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (29486275..29492752, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (29420987..29427464, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985549 Neighboring gene Sharpr-MPRA regulatory region 13625 Neighboring gene zinc and ring finger 3 Neighboring gene Sharpr-MPRA regulatory region 3696 Neighboring gene chromosome 22 open reading frame 31 Neighboring gene kringle containing transmembrane protein 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study identifies multiple susceptibility loci for pancreatic cancer.
EBI GWAS Catalog

General gene information

Markers

Other Names

  • CTA-747E2.11
  • ZNRF3 antisense RNA 1 (non-protein coding)

Clone Names

  • FLJ38169

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046851.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AL021393
    Related
    ENST00000325660.3

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    29024999..29031476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    29486275..29492752 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)