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NAV2-AS5 NAV2 antisense RNA 5 [ Homo sapiens (human) ]

Gene ID: 100874012, updated on 17-Jun-2024

Summary

Official Symbol
NAV2-AS5provided by HGNC
Official Full Name
NAV2 antisense RNA 5provided by HGNC
Primary source
HGNC:HGNC:40740
See related
Ensembl:ENSG00000255043 AllianceGenome:HGNC:40740
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See NAV2-AS5 in Genome Data Viewer
Location:
11p15.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (19502672..19507229, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (19622707..19627264, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (19524219..19528776, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene CSRP3 and E2F8 antisense RNA 1 Neighboring gene Sharpr-MPRA regulatory region 11719 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4516 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4517 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4518 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3199 Neighboring gene proliferating cell nuclear antigen pseudogene 4 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:19416525-19417056 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4519 Neighboring gene MPRA-validated peak1231 silencer Neighboring gene RNA, 5S ribosomal pseudogene 335 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:19463438-19464637 Neighboring gene neuron navigator 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4521 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4522 Neighboring gene NAV2 antisense RNA 4 Neighboring gene microRNA 4486

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_049725.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC023950, BC040220
    Related
    ENST00000528726.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    19502672..19507229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    19622707..19627264 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)