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LINC00278 long intergenic non-protein coding RNA 278 [ Homo sapiens (human) ]

Gene ID: 100873962, updated on 17-Jun-2024

Summary

Official Symbol
LINC00278provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 278provided by HGNC
Primary source
HGNC:HGNC:38712
See related
Ensembl:ENSG00000231535 AllianceGenome:HGNC:38712
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
YY1BM; NCRNA00278
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC00278 in Genome Data Viewer
Location:
Yp11.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (3002996..3102272)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (2680158..2779423)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (2871037..2970313)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene ZFY antisense RNA 1 Neighboring gene zinc finger protein Y-linked Neighboring gene eukaryotic translation elongation factor 1 alpha 1 pseudogene 41 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:2956017-2956558 Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase 5 pseudogene 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:3293771-3294308 Neighboring gene proline rich coiled-coil 2C pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046502.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AW772613, BF195971
    Related
    ENST00000425031.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

    Range
    3002996..3102272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060948.1 Alternate T2T-CHM13v2.0

    Range
    2680158..2779423
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)